Literature DB >> 16348543

Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization.

J L Garland1, A L Mills.   

Abstract

The BLOLOG redox technology based on tetrazolium dye reduction as an indicator of sole-carbon-source utilization was evaluated as a rapid, community-level method to characterize and classify heterotrophic microbial communities. Direct incubation of whole environmental samples (aquatic, soil, and rhizosphere) in BIOLOG plates containing 95 separate carbon sources produced community-dependent patterns of sole-carbon-source utilization. Principal-component analysis of color responses quantified from digitized images of plates revealed distinctive patterns among microbial habitats and spatial gradients within soil and estuarine sites. Correlation of the original carbon source variables to the principal components gives a functional basis to distinctions among communities. Intensive spatial and temporal analysis of microbial communities with this technique can produce ecologically relevant classifications of heterotrophic microbial communities.

Entities:  

Year:  1991        PMID: 16348543      PMCID: PMC183575          DOI: 10.1128/aem.57.8.2351-2359.1991

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  7 in total

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Journal:  Bioscience       Date:  1986-03       Impact factor: 8.589

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Journal:  Appl Environ Microbiol       Date:  1982-02       Impact factor: 4.792

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Journal:  Appl Environ Microbiol       Date:  1980-09       Impact factor: 4.792

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Journal:  Appl Environ Microbiol       Date:  1986-11       Impact factor: 4.792

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Authors:  B Lambert; P Meire; H Joos; P Lens; J Swings
Journal:  Appl Environ Microbiol       Date:  1990-11       Impact factor: 4.792

6.  Spatial distribution of biochemical parameters indicating biomass and community composition of microbial assemblies in estuarine mud flat sediments.

Authors:  T W Federle; M A Hullar; R J Livingston; D A Meeter; D C White
Journal:  Appl Environ Microbiol       Date:  1983-01       Impact factor: 4.792

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Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

  7 in total
  210 in total

1.  Impact of dilution on microbial community structure and functional potential: comparison of numerical simulations and batch culture experiments.

Authors:  R B Franklin; J L Garland; C H Bolster; A L Mills
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

2.  A method of profiling microbial communities based on a most-probable-number assay that uses BIOLOG plates and multiple sole carbon sources.

Authors:  M Gamo; T Shoji
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

3.  Effects of T4 lysozyme release from transgenic potato roots on bacterial rhizosphere communities are negligible relative to natural factors.

Authors:  Holger Heuer; Reiner M Kroppenstedt; Jana Lottmann; Gabriele Berg; Kornelia Smalla
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

4.  Microorganisms with a taste for vanilla: microbial ecology of traditional Indonesian vanilla curing.

Authors:  W F Röling; J Kerler; M Braster; A Apriyantono; H Stam; H W van Verseveld
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

5.  Application of carbon source utilization patterns to measure the metabolic similarity of complex dental plaque biofilm microcosms.

Authors:  Sally A Anderson; Christopher H Sissons; Megan J Coleman; Lisa Wong
Journal:  Appl Environ Microbiol       Date:  2002-11       Impact factor: 4.792

6.  Laser MICROSAMPLING of soil microbial community.

Authors:  M V Gorlenko; E A Chutko; E S Churbanova; N V Minaev; K I Kachesov; L V Lysak; S A Evlashin; V S Cheptsov; A O Rybaltovskiy; V I Yusupov; V S Zhigarkov; G A Davydova; B N Chichkov; V N Bagratashvili
Journal:  J Biol Eng       Date:  2018-11-28       Impact factor: 4.355

7.  Physiological and community responses of established grassland bacterial populations to water stress.

Authors:  Robert I Griffiths; Andrew S Whiteley; Anthony G O'Donnell; Mark J Bailey
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

8.  Seasonal changes in the rhizosphere microbial communities associated with field-grown genetically modified canola (Brassica napus).

Authors:  Kari E Dunfield; James J Germida
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

9.  Community-level physiological profiling performed with an oxygen-sensitive fluorophore in a microtiter plate.

Authors:  Jay L Garland; Michael S Roberts; Lanfang H Levine; Aaron L Mills
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

10.  A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil.

Authors:  Colin D Campbell; Stephen J Chapman; Clare M Cameron; Mitchell S Davidson; Jacqueline M Potts
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

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