Literature DB >> 16343945

A novel dual-axis iterative algorithm for electron tomography.

Jenna Tong1, Ilke Arslan, Paul Midgley.   

Abstract

A new algorithm for computing electron microscopy tomograms which combines iterative methods with dual-axis geometry is presented. Initial modelling using test data shows several improvements over both the weighted back-projection and simultaneous iterative reconstruction technique methods, with increased stability and tomogram fidelity under high-noise conditions. Preliminary experimental dual-axis reconstructions confirm the viability of the new algorithm.

Mesh：

Year:  2005        PMID： 16343945     DOI： 10.1016/j.jsb.2005.10.005

Source DB:  PubMed          Journal:  J Struct Biol        ISSN： 1047-8477            Impact factor:   2.867


  13 in total

1.  Three-dimensional elemental mapping of phosphorus by quantitative electron spectroscopic tomography (QuEST).

Authors:  M A Aronova; Y C Kim; R Harmon; A A Sousa; G Zhang; R D Leapman
Journal:  J Struct Biol       Date:  2007-07-06       Impact factor: 2.867

2.  Electron tomography and holography in materials science.

Authors:  Paul A Midgley; Rafal E Dunin-Borkowski
Journal:  Nat Mater       Date:  2009-04       Impact factor: 43.841

3.  Three-dimensional imaging of localized surface plasmon resonances of metal nanoparticles.

Authors:  Olivia Nicoletti; Francisco de la Peña; Rowan K Leary; Daniel J Holland; Caterina Ducati; Paul A Midgley
Journal:  Nature       Date:  2013-10-03       Impact factor: 49.962

4.  Marker-free dual-axis tilt series alignment.

Authors:  Hanspeter Winkler; Kenneth A Taylor
Journal:  J Struct Biol       Date:  2013-02-19       Impact factor: 2.867

5.  Alignment algorithms and per-particle CTF correction for single particle cryo-electron tomography.

Authors:  Jesús G Galaz-Montoya; Corey W Hecksel; Philip R Baldwin; Eryu Wang; Scott C Weaver; Michael F Schmid; Steven J Ludtke; Wah Chiu
Journal:  J Struct Biol       Date:  2016-03-22       Impact factor: 2.867

6.  A distributed multi-GPU system for high speed electron microscopic tomographic reconstruction.

Authors:  Shawn Q Zheng; Eric Branlund; Bettina Kesthelyi; Michael B Braunfeld; Yifan Cheng; John W Sedat; David A Agard
Journal:  Ultramicroscopy       Date:  2011-04-01       Impact factor: 2.689

Review 7.  Life inside a thin section: tomography.

Authors:  Xiaobing Chen; Christine A Winters; Thomas S Reese
Journal:  J Neurosci       Date:  2008-09-17       Impact factor: 6.167

8.  TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy.

Authors:  Cédric Messaoudii; Thomas Boudier; Carlos Oscar Sanchez Sorzano; Sergio Marco
Journal:  BMC Bioinformatics       Date:  2007-08-06       Impact factor: 3.169

Review 9.  A Survey of the Use of Iterative Reconstruction Algorithms in Electron Microscopy.

Authors:  C O S Sorzano; J Vargas; J Otón; J M de la Rosa-Trevín; J L Vilas; M Kazemi; R Melero; L Del Caño; J Cuenca; P Conesa; J Gómez-Blanco; R Marabini; J M Carazo
Journal:  Biomed Res Int       Date:  2017-09-17       Impact factor: 3.411

10.  Dual-axis target mapping and automated sequential acquisition of dual-axis EM tomographic data.

Authors:  Shawn Q Zheng; Atsushi Matsuda; Michael B Braunfeld; John W Sedat; David A Agard
Journal:  J Struct Biol       Date:  2009-06-21       Impact factor: 2.867
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