Literature DB >> 16339357

Insights on biology and evolution from microbial genome sequencing.

Claire M Fraser-Liggett1.   

Abstract

No field of research has embraced and applied genomic technology more than the field of microbiology. Comparative analysis of nearly 300 microbial species has demonstrated that the microbial genome is a dynamic entity shaped by multiple forces. Microbial genomics has provided a foundation for a broad range of applications, from understanding basic biological processes, host-pathogen interactions, and protein-protein interactions, to discovering DNA variations that can be used in genotyping or forensic analyses, the design of novel antimicrobial compounds and vaccines, and the engineering of microbes for industrial applications. Most recently, metagenomics approaches are allowing us to begin to probe complex microbial communities for the first time, and they hold great promise in helping to unravel the relationships between microbial species.

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Substances:

Year:  2005        PMID: 16339357     DOI: 10.1101/gr.3724205

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  44 in total

1.  Inferring bacterial genome flux while considering truncated genes.

Authors:  Weilong Hao; G Brian Golding
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

Review 2.  Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.

Authors:  Tim T Binnewies; Yair Motro; Peter F Hallin; Ole Lund; David Dunn; Tom La; David J Hampson; Matthew Bellgard; Trudy M Wassenaar; David W Ussery
Journal:  Funct Integr Genomics       Date:  2006-05-12       Impact factor: 3.410

3.  Census of prokaryotic senses.

Authors:  Robert B Bourret
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

4.  Pattern pluralism and the Tree of Life hypothesis.

Authors:  W Ford Doolittle; Eric Bapteste
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-29       Impact factor: 11.205

5.  Exploring the Genomic Diversity and Cariogenic Differences of Streptococcus mutans Strains Through Pan-Genome and Comparative Genome Analysis.

Authors:  Peiqi Meng; Chang Lu; Qian Zhang; Jiuxiang Lin; Feng Chen
Journal:  Curr Microbiol       Date:  2017-07-17       Impact factor: 2.188

6.  Correlation between detection of a plasmid and high-level virulence of Vibrio nigripulchritudo, a pathogen of the shrimp Litopenaeus stylirostris.

Authors:  Yann Reynaud; Denis Saulnier; Didier Mazel; Cyrille Goarant; Frédérique Le Roux
Journal:  Appl Environ Microbiol       Date:  2008-03-21       Impact factor: 4.792

7.  Does gene translocation accelerate the evolution of laterally transferred genes?

Authors:  Weilong Hao; G Brian Golding
Journal:  Genetics       Date:  2009-05-27       Impact factor: 4.562

8.  Structural genomics is the largest contributor of novel structural leverage.

Authors:  Rajesh Nair; Jinfeng Liu; Ta-Tsen Soong; Thomas B Acton; John K Everett; Andrei Kouranov; Andras Fiser; Adam Godzik; Lukasz Jaroszewski; Christine Orengo; Gaetano T Montelione; Burkhard Rost
Journal:  J Struct Funct Genomics       Date:  2009-02-05

Review 9.  The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli.

Authors:  Adam M Feist; Bernhard Ø Palsson
Journal:  Nat Biotechnol       Date:  2008-06       Impact factor: 54.908

10.  Fierce competition between Toxoplasma and Chlamydia for host cell structures in dually infected cells.

Authors:  Julia D Romano; Catherine de Beaumont; Jose A Carrasco; Karen Ehrenman; Patrik M Bavoil; Isabelle Coppens
Journal:  Eukaryot Cell       Date:  2012-12-14
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