Literature DB >> 16337597

The RNA tether from the poly(A) signal to the polymerase mediates coupling of transcription to cleavage and polyadenylation.

Frank Rigo1, Amir Kazerouninia, Anita Nag, Harold G Martinson.   

Abstract

We have investigated the mechanism by which transcription accelerates cleavage and polyadenylation in vitro. By using a coupled transcription-processing system, we show that rapid and efficient 3' end processing occurs in the absence of crowding agents like polyvinyl alcohol. The continuity of the RNA from the poly(A) signal down to the polymerase is critical to this processing. If this tether is cut with DNA oligonucleotides and RNaseH during transcription, the efficiency of processing is drastically reduced. The polymerase is known to be an integral part of the cleavage and polyadenylation apparatus. RNA polymerase II pull-down and immobilized template experiments suggest that the role of the tether is to hold the poly(A) signal close to the polymerase during the early stages of processing complex assembly until the complex is sufficiently mature to remain stably associated with the polymerase on its own.

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Year:  2005        PMID: 16337597     DOI: 10.1016/j.molcel.2005.09.026

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  23 in total

1.  The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity.

Authors:  Anita Nag; Kazim Narsinh; Amir Kazerouninia; Harold G Martinson
Journal:  RNA       Date:  2006-06-14       Impact factor: 4.942

2.  Functional coupling of last-intron splicing and 3'-end processing to transcription in vitro: the poly(A) signal couples to splicing before committing to cleavage.

Authors:  Frank Rigo; Harold G Martinson
Journal:  Mol Cell Biol       Date:  2007-10-29       Impact factor: 4.272

3.  Concurrent splicing and transcription are not sufficient to enhance splicing efficiency.

Authors:  Denis Lazarev; James L Manley
Journal:  RNA       Date:  2007-07-13       Impact factor: 4.942

4.  RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.

Authors:  Kira Glover-Cutter; Soojin Kim; Joaquin Espinosa; David L Bentley
Journal:  Nat Struct Mol Biol       Date:  2007-12-23       Impact factor: 15.369

Review 5.  Quality control of mRNP in the nucleus.

Authors:  Manfred Schmid; Torben Heick Jensen
Journal:  Chromosoma       Date:  2008-06-18       Impact factor: 4.316

6.  Two G-rich regulatory elements located adjacent to and 440 nucleotides downstream of the core poly(A) site of the intronless melanocortin receptor 1 gene are critical for efficient 3' end processing.

Authors:  Martin Dalziel; Nuno Miguel Nunes; Andre Furger
Journal:  Mol Cell Biol       Date:  2006-12-22       Impact factor: 4.272

7.  Functional coupling of RNAP II transcription to spliceosome assembly.

Authors:  Rita Das; Kobina Dufu; Ben Romney; Megan Feldt; Mark Elenko; Robin Reed
Journal:  Genes Dev       Date:  2006-05-01       Impact factor: 11.361

8.  A functional human Poly(A) site requires only a potent DSE and an A-rich upstream sequence.

Authors:  Nuno Miguel Nunes; Wencheng Li; Bin Tian; André Furger
Journal:  EMBO J       Date:  2010-03-25       Impact factor: 11.598

9.  In vitro systems for coupling RNAP II transcription to splicing and polyadenylation.

Authors:  Eric G Folco; Robin Reed
Journal:  Methods Mol Biol       Date:  2014

10.  Poly(A) signal-dependent degradation of unprocessed nascent transcripts accompanies poly(A) signal-dependent transcriptional pausing in vitro.

Authors:  Amir Kazerouninia; Benson Ngo; Harold G Martinson
Journal:  RNA       Date:  2009-11-19       Impact factor: 4.942

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