Literature DB >> 16333341

Characteristics of adjacent family 6 acetylxylan esterases from Fibrobacter succinogenes and the interaction with the Xyn10E xylanase in hydrolysis of acetylated xylan.

Dong Keun Kam1, Hyun-Sik Jun, Jong K Ha, G Douglas Inglis, Cecil W Forsberg.   

Abstract

Acetylxylan esterase genes axe6A and axe6B located adjacent to one another on a Fibrobacter succinogenes chromosome have been separately cloned and their properties characterized. The corresponding esterases contained an N-terminal carbohydrate esterase family 6 catalytic domain (CD) and a C-terminal family 6 carbohydrate-binding module (CBM). The amino acid sequences of the CDs and CBMs were found to exhibit 52% and 40% amino acid similarity, respectively. The CDs of the two esterases exhibited the highest similarity to CDs of acetylxylan esterases: AxeA from the ruminal fungi Orpinomyces sp. and BnaA from Neocallimastix patriciarum. Axe6A and Axe6B were optimally active at neutral pH and had low K(m) values of 0.084 and 0.056 mmol x L(-1), respectively. Axe6A and Axe6B were shown to bind to insoluble cellulose and xylan and to soluble arabinoxylan. Axe6A deacetylated acetylated xylan at the same initial rate in the presence and absence of added Xyn10E xylanase from F. succinogenes, but the action of the xylanase on acetylated xylan was dependent upon the initial activity of Axe6A. The capacity of acetylxylan esterases to bind to plant cell wall polymers and to independently deacetylate xylan enabling xylanase to release xylooligo saccharides, documents the central role these enzymes have to improve access of F. succinogenes to cellulose.

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Year:  2005        PMID: 16333341     DOI: 10.1139/w05-074

Source DB:  PubMed          Journal:  Can J Microbiol        ISSN: 0008-4166            Impact factor:   2.419


  11 in total

1.  Domain analysis of a modular alpha-L-Arabinofuranosidase with a unique carbohydrate binding strategy from the fiber-degrading bacterium Fibrobacter succinogenes S85.

Authors:  Shosuke Yoshida; Charles W Hespen; Robert L Beverly; Roderick I Mackie; Isaac K O Cann
Journal:  J Bacteriol       Date:  2010-08-13       Impact factor: 3.490

2.  Cel9D, an atypical 1,4-beta-D-glucan glucohydrolase from Fibrobacter succinogenes: characteristics, catalytic residues, and synergistic interactions with other cellulases.

Authors:  Meng Qi; Hyun-Sik Jun; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2008-01-18       Impact factor: 3.490

3.  Genomic differences between Fibrobacter succinogenes S85 and Fibrobacter intestinalis DR7, identified by suppression subtractive hybridization.

Authors:  M Qi; K E Nelson; S C Daugherty; W C Nelson; I R Hance; M Morrison; C W Forsberg
Journal:  Appl Environ Microbiol       Date:  2007-12-21       Impact factor: 4.792

4.  Biochemical and domain analyses of FSUAxe6B, a modular acetyl xylan esterase, identify a unique carbohydrate binding module in Fibrobacter succinogenes S85.

Authors:  Shosuke Yoshida; Roderick I Mackie; Isaac K O Cann
Journal:  J Bacteriol       Date:  2009-11-06       Impact factor: 3.490

5.  Characterization and synergistic interactions of Fibrobacter succinogenes glycoside hydrolases.

Authors:  Meng Qi; Hyun-Sik Jun; Cecil W Forsberg
Journal:  Appl Environ Microbiol       Date:  2007-07-27       Impact factor: 4.792

6.  Outer membrane proteins of Fibrobacter succinogenes with potential roles in adhesion to cellulose and in cellulose digestion.

Authors:  Hyun-Sik Jun; Meng Qi; Joshua Gong; Emmanuel E Egbosimba; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

7.  Isolation and identification of cellulose-binding proteins from sheep rumen contents.

Authors:  Atsushi Toyoda; Wataru Iio; Makoto Mitsumori; Hajime Minato
Journal:  Appl Environ Microbiol       Date:  2009-01-16       Impact factor: 4.792

8.  The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist.

Authors:  Garret Suen; Paul J Weimer; David M Stevenson; Frank O Aylward; Julie Boyum; Jan Deneke; Colleen Drinkwater; Natalia N Ivanova; Natalia Mikhailova; Olga Chertkov; Lynne A Goodwin; Cameron R Currie; David Mead; Phillip J Brumm
Journal:  PLoS One       Date:  2011-04-19       Impact factor: 3.240

Review 9.  Pretreatment of Lignocellulosic Materials as Substrates for Fermentation Processes.

Authors:  Karolina Kucharska; Piotr Rybarczyk; Iwona Hołowacz; Rafał Łukajtis; Marta Glinka; Marian Kamiński
Journal:  Molecules       Date:  2018-11-10       Impact factor: 4.411

10.  The production and characterization of a new active lipase from Acremonium alcalophilum using a plant bioreactor.

Authors:  Eridan Orlando Pereira; Adrian Tsang; Tim A McAllister; Rima Menassa
Journal:  Biotechnol Biofuels       Date:  2013-08-01       Impact factor: 6.040

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