Literature DB >> 16332059

Weak alignment of paramagnetic proteins warrants correction for residual CSA effects in measurements of pseudocontact shifts.

Michael John1, Ah Young Park, Guido Pintacuda, Nicholas E Dixon, Gottfried Otting.   

Abstract

Paramagnetic metal ions can induce molecular alignment with respect to the magnetic field. This alignment generates residual anisotropic chemical shifts (RACS) due to nonisotropic averaging over the molecular orientations. Using a 30 kDa protein-protein complex, the RACS effects are shown to be significant for heteronuclear spins with large chemical shift anisotropies, lanthanide ions with large anisotropic magnetic susceptibility tensors, and measurements at high magnetic field. Therefore, RACS must be taken into account when pseudocontact shifts are measured by comparison of chemical shifts observed between complexes with paramagnetic and diamagnetic lanthanide ions. The results are of particular importance when different pseudocontact shifts measured for the 1HN, 15N, and 13C' spins of a peptide group are used to restrain its orientation with respect to the electronic magnetic susceptibility tensor in structure calculations.

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Year:  2005        PMID: 16332059     DOI: 10.1021/ja0564259

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  25 in total

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2.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

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3.  Efficient chi-tensor determination and NH assignment of paramagnetic proteins.

Authors:  Christophe Schmitz; Michael John; Ah Young Park; Nicholas E Dixon; Gottfried Otting; Guido Pintacuda; Thomas Huber
Journal:  J Biomol NMR       Date:  2006-06-10       Impact factor: 2.835

4.  Observation of microsecond time-scale protein dynamics in the presence of Ln3+ ions: application to the N-terminal domain of cardiac troponin C.

Authors:  Christian Eichmüller; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2006-12-19       Impact factor: 2.835

5.  Solution NMR study of the yeast cytochrome c peroxidase: cytochrome c interaction.

Authors:  Alexander N Volkov; Nico A J van Nuland
Journal:  J Biomol NMR       Date:  2013-05-25       Impact factor: 2.835

6.  Numbat: an interactive software tool for fitting Deltachi-tensors to molecular coordinates using pseudocontact shifts.

Authors:  Christophe Schmitz; Mitchell J Stanton-Cook; Xun-Cheng Su; Gottfried Otting; Thomas Huber
Journal:  J Biomol NMR       Date:  2008-06-24       Impact factor: 2.835

Review 7.  Paramagnetic labelling of proteins and oligonucleotides for NMR.

Authors:  Xun-Cheng Su; Gottfried Otting
Journal:  J Biomol NMR       Date:  2009-06-16       Impact factor: 2.835

8.  A minor conformation of a lanthanide tag on adenylate kinase characterized by paramagnetic relaxation dispersion NMR spectroscopy.

Authors:  Mathias A S Hass; Wei-Min Liu; Roman V Agafonov; Renee Otten; Lien A Phung; Jesika T Schilder; Dorothee Kern; Marcellus Ubbink
Journal:  J Biomol NMR       Date:  2015-01-08       Impact factor: 2.835

9.  Structure restraints from heteronuclear pseudocontact shifts generated by lanthanide tags at two different sites.

Authors:  Benjamin J G Pearce; Shereen Jabar; Choy-Theng Loh; Monika Szabo; Bim Graham; Gottfried Otting
Journal:  J Biomol NMR       Date:  2017-04-22       Impact factor: 2.835

10.  Long-Range RNA Structural Information via a Paramagnetically Tagged Reporter Protein.

Authors:  Madeleine Strickland; Jonathan Catazaro; Rohith Rajasekaran; Marie-Paule Strub; Colin O'Hern; Guillermo A Bermejo; Michael F Summers; Jan Marchant; Nico Tjandra
Journal:  J Am Chem Soc       Date:  2019-01-22       Impact factor: 15.419

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