Literature DB >> 16330778

Tautomeric selectivity of the excited-state lifetime of guanine/cytosine base pairs: the role of electron-driven proton-transfer processes.

Andrzej L Sobolewski1, Wolfgang Domcke, C Hättig.   

Abstract

The UV spectra of three different conformers of the guanine/cytosine base pair were recorded recently with UV-IR double-resonance techniques in a supersonic jet [Abo-Riziq, A., Grace, L., Nir, E., Kabelac, M., Hobza, P. & de Vries, M. S. (2005) Proc. Natl. Acad. Sci. USA 102, 20-23]. The spectra provide evidence for a very efficient excited-state deactivation mechanism that is specific for the Watson-Crick structure and may be essential for the photostability of DNA. Here we report results of ab initio electronic-structure calculations for the excited electronic states of the three lowest-energy conformers of the guanine/cytosine base pair. The calculations reveal that electron-driven interbase proton-transfer processes play an important role in the photochemistry of these systems. The exceptionally short lifetime of the UV-absorbing states of the Watson-Crick conformer is tentatively explained by the existence of a barrierless reaction path that connects the spectroscopic (1)pi pi * excited state with the electronic ground state via two electronic curve crossings. For the non-Watson-Crick structures, the photochemically reactive state is located at higher energies, resulting in a barrier for proton transfer and, thus, a longer lifetime of the UV-absorbing (1)pi pi * state. The computational results support the conjecture that the photochemistry of hydrogen bonds plays a decisive role for the photostability of the molecular encoding of the genetic information in isolated DNA base pairs.

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Year:  2005        PMID: 16330778      PMCID: PMC1312371          DOI: 10.1073/pnas.0504087102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  Efficient deactivation of a model base pair via excited-state hydrogen transfer.

Authors:  Thomas Schultz; Elena Samoylova; Wolfgang Radloff; Ingolf V Hertel; Andrzej L Sobolewski; Wolfgang Domcke
Journal:  Science       Date:  2004-12-03       Impact factor: 47.728

2.  Photochemical selectivity in guanine-cytosine base-pair structures.

Authors:  Ali Abo-Riziq; Louis Grace; Eyal Nir; Martin Kabelac; Pavel Hobza; Mattanjah S de Vries
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-23       Impact factor: 11.205

3.  Pairing of isolated nucleic-acid bases in the absence of the DNA backbone.

Authors:  E Nir; K Kleinermanns; M S de Vries
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

4.  Pairing of isolated nucleobases: double resonance laser spectroscopy of adenine-thymine.

Authors:  Christian Plützer; Isabel Hünig; Karl Kleinermanns; Eyal Nir; Mattanjah S de Vries
Journal:  Chemphyschem       Date:  2003-08-18       Impact factor: 3.102

  4 in total
  22 in total

Review 1.  Proton-coupled electron transfer in DNA on formation of radiation-produced ion radicals.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  Chem Rev       Date:  2010-05-05       Impact factor: 60.622

2.  Ultrafast excited-state dynamics of RNA and DNA C tracts.

Authors:  Boiko Cohen; Matthew H Larson; Bern Kohler
Journal:  Chem Phys       Date:  2008-06       Impact factor: 2.348

3.  Ionization of dimethyluracil dimers leads to facile proton transfer in the absence of hydrogen bonds.

Authors:  Amir Golan; Ksenia B Bravaya; Romas Kudirka; Oleg Kostko; Stephen R Leone; Anna I Krylov; Musahid Ahmed
Journal:  Nat Chem       Date:  2012-03-18       Impact factor: 24.427

Review 4.  Mechanisms for DNA charge transport.

Authors:  Joseph C Genereux; Jacqueline K Barton
Journal:  Chem Rev       Date:  2010-03-10       Impact factor: 60.622

5.  Relaxation mechanisms of UV-photoexcited DNA and RNA nucleobases.

Authors:  Mario Barbatti; Adélia J A Aquino; Jaroslaw J Szymczak; Dana Nachtigallová; Pavel Hobza; Hans Lischka
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

6.  Photochemistry of hydrogen-bonded aromatic pairs: Quantum dynamical calculations for the pyrrole-pyridine complex.

Authors:  Zhenggang Lan; Luis Manuel Frutos; Andrzej L Sobolewski; Wolfgang Domcke
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-28       Impact factor: 11.205

7.  Deuterium isotope effect on excited-state dynamics in an alternating GC oligonucleotide.

Authors:  Kimberly de La Harpe; Carlos E Crespo-Hernández; Bern Kohler
Journal:  J Am Chem Soc       Date:  2009-12-09       Impact factor: 15.419

8.  Excited state proton-coupled electron transfer in 8-oxoG-C and 8-oxoG-A base pairs: a time dependent density functional theory (TD-DFT) study.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  Photochem Photobiol Sci       Date:  2013-08       Impact factor: 3.982

9.  On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

Authors:  Armen Y Mulkidjanian
Journal:  Biol Direct       Date:  2009-08-24       Impact factor: 4.540

10.  A dynamic and electrostatic potential prediction of the prototropic tautomerism between imidazole 3-oxide and 1-hydroxyimidazole in external electric field.

Authors:  Yong Wang; Fu-de Ren; Duan-Lin Cao
Journal:  J Mol Model       Date:  2019-10-28       Impact factor: 1.810

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