Literature DB >> 16326809

ATP hydrolysis is required to reset the ATP-binding cassette dimer into the resting-state conformation.

Gang Lu1, James M Westbrooks, Amy L Davidson, Jue Chen.   

Abstract

ATP-binding cassette (ABC) transporters couple ATP binding and hydrolysis to the movement of substances across the membrane; conformational changes clearly play an important role in the transporter mechanism. Previously, we have shown that a dimer of MalK, the ATPase subunit of the maltose transporter from Escherichia coli, undergoes a tweezers-like motion in a transport cycle. The MalK monomer consists of an N-terminal nucleotide binding domain and a C-terminal regulatory domain. The two nucleotide-binding domains in a dimer are either open or closed, depending on whether ATP is present, while the regulatory domains maintain contacts to hold the dimer together. In this work, the structure of MalK in a posthydrolysis state is presented, obtained by cocrystallizing MalK with ATP-Mg(2+). ATP was hydrolyzed in the crystallization drop, and ADP-Mg(2+) was found in the resulting crystal structure. In contrast to the ATP-bound form where two ATP molecules are buried in a closed interface between the nucleotide-binding domains, the two nucleotide-binding domains of the ADP-bound form are open, indicating that ADP, unlike ATP, cannot stabilize the closed form. This conclusion is further supported by oligomerization studies of MalK in solution. At low protein concentrations, ATP promotes dimerization of MalK, whereas ADP does not. The structures of dimeric MalK in the nucleotide-free, ATP-bound, and ADP-bound forms provide a framework for understanding the nature of the conformational changes that occur in an ATP-binding cassette transporter hydrolysis cycle, as well as how conformational changes in MalK are coupled to solute transport.

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Year:  2005        PMID: 16326809      PMCID: PMC1312379          DOI: 10.1073/pnas.0506039102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Molecular and biochemical analysis of MalK, the ATP-hydrolyzing subunit of the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus litoralis.

Authors:  G Greller; R Horlacher; J DiRuggiero; W Boos
Journal:  J Biol Chem       Date:  1999-07-16       Impact factor: 5.157

2.  Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily.

Authors:  K P Hopfner; A Karcher; D S Shin; L Craig; L M Arthur; J P Carney; J A Tainer
Journal:  Cell       Date:  2000-06-23       Impact factor: 41.582

3.  MalK forms a dimer independent of its assembly into the MalFGK2 ATP-binding cassette transporter of Escherichia coli.

Authors:  K A Kennedy; B Traxler
Journal:  J Biol Chem       Date:  1999-03-05       Impact factor: 5.157

4.  Purification and characterization of HisP, the ATP-binding subunit of a traffic ATPase (ABC transporter), the histidine permease of Salmonella typhimurium. Solubility, dimerization, and ATPase activity.

Authors:  K Nikaido; P Q Liu; G F Ames
Journal:  J Biol Chem       Date:  1997-10-31       Impact factor: 5.157

5.  Functional reassembly of the Escherichia coli maltose transporter following purification of a MalF-MalG subassembly.

Authors:  Susan Sharma; Johnny A Davis; Tulin Ayvaz; Beth Traxler; Amy L Davidson
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

6.  X-ray structure of RLI, an essential twin cassette ABC ATPase involved in ribosome biogenesis and HIV capsid assembly.

Authors:  Annette Karcher; Katharina Büttner; Birgit Märtens; Ralf-Peter Jansen; Karl-Peter Hopfner
Journal:  Structure       Date:  2005-04       Impact factor: 5.006

7.  Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius.

Authors:  Frank Scheffel; Ulrike Demmer; Eberhard Warkentin; Anja Hülsmann; Erwin Schneider; Ulrich Ermler
Journal:  FEBS Lett       Date:  2005-04-25       Impact factor: 4.124

8.  Mutation of a single MalK subunit severely impairs maltose transport activity in Escherichia coli.

Authors:  A L Davidson; S Sharma
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

9.  ATP modulates subunit-subunit interactions in an ATP-binding cassette transporter (MalFGK2) determined by site-directed chemical cross-linking.

Authors:  S Hunke; M Mourez; M Jehanno; E Dassa; E Schneider
Journal:  J Biol Chem       Date:  2000-05-19       Impact factor: 5.157

10.  Crystal structure of the ATP-binding subunit of an ABC transporter.

Authors:  L W Hung; I X Wang; K Nikaido; P Q Liu; G F Ames; S H Kim
Journal:  Nature       Date:  1998-12-17       Impact factor: 49.962

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  63 in total

Review 1.  The role of ATP-binding cassette transporters in bacterial pathogenicity.

Authors:  Victoria G Lewis; Miranda P Ween; Christopher A McDevitt
Journal:  Protoplasma       Date:  2012-01-13       Impact factor: 3.356

2.  The C-terminal zinc finger of UvrA does not bind DNA directly but regulates damage-specific DNA binding.

Authors:  Deborah L Croteau; Matthew J DellaVecchia; Hong Wang; Rachelle J Bienstock; Mark A Melton; Bennett Van Houten
Journal:  J Biol Chem       Date:  2006-07-07       Impact factor: 5.157

3.  A structural analysis of asymmetry required for catalytic activity of an ABC-ATPase domain dimer.

Authors:  Jelena Zaitseva; Christine Oswald; Thorsten Jumpertz; Stefan Jenewein; Alexander Wiedenmann; I Barry Holland; Lutz Schmitt
Journal:  EMBO J       Date:  2006-07-06       Impact factor: 11.598

4.  Characterization of the LSGGQ and H motifs from the Escherichia coli lipid A transporter MsbA.

Authors:  Adam H Buchaklian; Candice S Klug
Journal:  Biochemistry       Date:  2006-10-17       Impact factor: 3.162

5.  Direct Spectroscopic Detection of ATP Turnover Reveals Mechanistic Divergence of ABC Exporters.

Authors:  Alberto Collauto; Smriti Mishra; Aleksei Litvinov; Hassane S Mchaourab; Daniella Goldfarb
Journal:  Structure       Date:  2017-07-14       Impact factor: 5.006

6.  Simulation of the coupling between nucleotide binding and transmembrane domains in the ATP binding cassette transporter BtuCD.

Authors:  Jacob Sonne; Christian Kandt; Günther H Peters; Flemming Y Hansen; Morten Ø Jensen; D Peter Tieleman
Journal:  Biophys J       Date:  2007-01-05       Impact factor: 4.033

7.  The hydroxyl group of S685 in Walker A motif and the carboxyl group of D792 in Walker B motif of NBD1 play a crucial role for multidrug resistance protein folding and function.

Authors:  Runying Yang; Robert Scavetta; Xiu-Bao Chang
Journal:  Biochim Biophys Acta       Date:  2007-11-29

8.  Flexibility in the ABC transporter MsbA: Alternating access with a twist.

Authors:  Andrew Ward; Christopher L Reyes; Jodie Yu; Christopher B Roth; Geoffrey Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-16       Impact factor: 11.205

9.  The conformational coupling and translocation mechanism of vitamin B12 ATP-binding cassette transporter BtuCD.

Authors:  Jingwei Weng; Jianpeng Ma; Kangnian Fan; Wenning Wang
Journal:  Biophys J       Date:  2007-10-19       Impact factor: 4.033

10.  Asymmetric conformational flexibility in the ATP-binding cassette transporter HI1470/1.

Authors:  Jingwei Weng; Jianpeng Ma; Kangnian Fan; Wenning Wang
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

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