Literature DB >> 16314268

Conditional knockout mice to study alternative splicing in vivo.

Xiangdong Xu1, Xiang-Dong Fu.   

Abstract

Analysis of genomes has revealed that the total number of human genes is comparable to those of simpler organisms, and thus, the number of genes does not correlate with the complexity and functional diversity of different organisms. Multiple mechanisms, including alternative splicing, are believed to contribute to the molecular complexity in higher eukaryotes. Given the fact that more than half of human genes undergo alternative splicing, however, little is known about the biological relevance of most alternative splicing events and their regulatory mechanisms. Recent work has highlighted the power of reverse genetic approaches in addressing regulated splicing in animal models. Here, we focus on the conditional knockout approach adapted for splicing research with the intention to provide a general guide to the generation of mouse models to study regulated splicing in development and disease.

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Year:  2005        PMID: 16314268     DOI: 10.1016/j.ymeth.2005.07.019

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  10 in total

1.  Identification of RNA-binding proteins that regulate FGFR2 splicing through the use of sensitive and specific dual color fluorescence minigene assays.

Authors:  Emily A Newman; Stephanie J Muh; Ruben H Hovhannisyan; Claude C Warzecha; Richard B Jones; Wallace L McKeehan; Russ P Carstens
Journal:  RNA       Date:  2006-04-07       Impact factor: 4.942

2.  Repression of the Central Splicing Regulator RBFox2 Is Functionally Linked to Pressure Overload-Induced Heart Failure.

Authors:  Chaoliang Wei; Jinsong Qiu; Yu Zhou; Yuanchao Xue; Jing Hu; Kunfu Ouyang; Indroneal Banerjee; Caimei Zhang; Biyi Chen; Hairi Li; Ju Chen; Long-Sheng Song; Xiang-Dong Fu
Journal:  Cell Rep       Date:  2015-03-05       Impact factor: 9.423

3.  Splicing factor SRSF3 is crucial for hepatocyte differentiation and metabolic function.

Authors:  Supriya Sen; Hassan Jumaa; Nicholas J G Webster
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

4.  Conserved proline-directed phosphorylation regulates SR protein conformation and splicing function.

Authors:  Malik M Keshwani; Brandon E Aubol; Laurent Fattet; Chen-Ting Ma; Jinsong Qiu; Patricia A Jennings; Xiang-Dong Fu; Joseph A Adams
Journal:  Biochem J       Date:  2015-03-01       Impact factor: 3.857

Review 5.  The impact of alternative splicing in vivo: mouse models show the way.

Authors:  Tarik Möröy; Florian Heyd
Journal:  RNA       Date:  2007-06-11       Impact factor: 4.942

6.  NSrp70 is a novel nuclear speckle-related protein that modulates alternative pre-mRNA splicing in vivo.

Authors:  Young-Dae Kim; Jung-Yoon Lee; Kyu-Man Oh; Masatake Araki; Kimi Araki; Ken-ichi Yamamura; Chang-Duk Jun
Journal:  Nucleic Acids Res       Date:  2011-02-03       Impact factor: 16.971

7.  A role for the serine/arginine-rich (SR) protein B52/SRSF6 in cell growth and myc expression in Drosophila.

Authors:  Céline Fernando; Agnès Audibert; Françoise Simon; Jamal Tazi; François Juge
Journal:  Genetics       Date:  2015-02-12       Impact factor: 4.562

Review 8.  Blood-testis barrier and spermatogenesis: lessons from genetically-modified mice.

Authors:  Xiao-Hua Jiang; Ihtisham Bukhari; Wei Zheng; Shi Yin; Zheng Wang; Howard J Cooke; Qing-Hua Shi
Journal:  Asian J Androl       Date:  2014 Jul-Aug       Impact factor: 3.285

9.  Mutually exclusive acetylation and ubiquitylation of the splicing factor SRSF5 control tumor growth.

Authors:  Yuhan Chen; Qingyang Huang; Wen Liu; Qiong Zhu; Chun-Ping Cui; Liang Xu; Xing Guo; Ping Wang; Jingwen Liu; Guanglong Dong; Wenyi Wei; Cui Hua Liu; Zhichun Feng; Fuchu He; Lingqiang Zhang
Journal:  Nat Commun       Date:  2018-06-25       Impact factor: 14.919

10.  A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

Authors:  Debopriya Das; Tyson A Clark; Anthony Schweitzer; Miki Yamamoto; Henry Marr; Josh Arribere; Simon Minovitsky; Alexander Poliakov; Inna Dubchak; John E Blume; John G Conboy
Journal:  Nucleic Acids Res       Date:  2007-07-10       Impact factor: 16.971

  10 in total

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