Literature DB >> 16299387

Genetic addiction: selfish gene's strategy for symbiosis in the genome.

Atsushi Mochizuki1, Koji Yahara, Ichizo Kobayashi, Yoh Iwasa.   

Abstract

The evolution and maintenance of the phenomenon of postsegregational host killing or genetic addiction are paradoxical. In this phenomenon, a gene complex, once established in a genome, programs death of a host cell that has eliminated it. The intact form of the gene complex would survive in other members of the host population. It is controversial as to why these genetic elements are maintained, due to the lethal effects of host killing, or perhaps some other properties are beneficial to the host. We analyzed their population dynamics by analytical methods and computer simulations. Genetic addiction turned out to be advantageous to the gene complex in the presence of a competitor genetic element. The advantage is, however, limited in a population without spatial structure, such as that in a well-mixed liquid culture. In contrast, in a structured habitat, such as the surface of a solid medium, the addiction gene complex can increase in frequency, irrespective of its initial density. Our demonstration that genomes can evolve through acquisition of addiction genes has implications for the general question of how a genome can evolve as a community of potentially selfish genes.

Mesh:

Year:  2005        PMID: 16299387      PMCID: PMC1456228          DOI: 10.1534/genetics.105.042895

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  19 in total

1.  Experimental genome evolution: large-scale genome rearrangements associated with resistance to replacement of a chromosomal restriction-modification gene complex.

Authors:  N Handa; Y Nakayama; M Sadykov; I Kobayashi
Journal:  Mol Microbiol       Date:  2001-05       Impact factor: 3.501

2.  Multiplication of a restriction-modification gene complex.

Authors:  Marat Sadykov; Yasuo Asami; Hironori Niki; Naofumi Handa; Mitsuhiro Itaya; Masaru Tanokura; Ichizo Kobayashi
Journal:  Mol Microbiol       Date:  2003-04       Impact factor: 3.501

Review 3.  Gene transfer occurs with enhanced efficiency in biofilms and induces enhanced stabilisation of the biofilm structure.

Authors:  Søren Molin; Tim Tolker-Nielsen
Journal:  Curr Opin Biotechnol       Date:  2003-06       Impact factor: 9.740

Review 4.  Prokaryotic toxin-antitoxin stress response loci.

Authors:  Kenn Gerdes; Susanne K Christensen; Anders Løbner-Olesen
Journal:  Nat Rev Microbiol       Date:  2005-05       Impact factor: 60.633

Review 5.  Antisense RNA-regulated programmed cell death.

Authors:  K Gerdes; A P Gultyaev; T Franch; K Pedersen; N D Mikkelsen
Journal:  Annu Rev Genet       Date:  1997       Impact factor: 16.830

6.  Allelopathy in Spatially Distributed Populations

Authors: 
Journal:  J Theor Biol       Date:  1997-03-21       Impact factor: 2.691

7.  Restriction-modification gene complexes as selfish gene entities: roles of a regulatory system in their establishment, maintenance, and apoptotic mutual exclusion.

Authors:  Y Nakayama; I Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

8.  Autoregulation of the ccd operon in the F plasmid.

Authors:  R de Feyter; C Wallace; D Lane
Journal:  Mol Gen Genet       Date:  1989-09

9.  Selfish behavior of restriction-modification systems.

Authors:  T Naito; K Kusano; I Kobayashi
Journal:  Science       Date:  1995-02-10       Impact factor: 47.728

10.  Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes.

Authors:  Deo Prakash Pandey; Kenn Gerdes
Journal:  Nucleic Acids Res       Date:  2005-02-17       Impact factor: 16.971

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  36 in total

Review 1.  What traits are carried on mobile genetic elements, and why?

Authors:  D J Rankin; E P C Rocha; S P Brown
Journal:  Heredity (Edinb)       Date:  2010-03-24       Impact factor: 3.821

2.  Within-host competition selects for plasmid-encoded toxin-antitoxin systems.

Authors:  Tim F Cooper; Tiago Paixão; Jack A Heinemann
Journal:  Proc Biol Sci       Date:  2010-05-26       Impact factor: 5.349

3.  Evolution of DNA double-strand break repair by gene conversion: coevolution between a phage and a restriction-modification system.

Authors:  Koji Yahara; Ryota Horie; Ichizo Kobayashi; Akira Sasaki
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

4.  Hypothetical functions of toxin-antitoxin systems.

Authors:  Roy David Magnuson
Journal:  J Bacteriol       Date:  2007-07-06       Impact factor: 3.490

5.  Modelling the spatial dynamics of plasmid transfer and persistence.

Authors:  Stephen M Krone; Ruinan Lu; Randal Fox; Haruo Suzuki; Eva M Top
Journal:  Microbiology (Reading)       Date:  2007-08       Impact factor: 2.777

6.  Maintenance forced by a restriction-modification system can be modulated by a region in its modification enzyme not essential for methyltransferase activity.

Authors:  Satona Ohno; Naofumi Handa; Miki Watanabe-Matsui; Noriko Takahashi; Ichizo Kobayashi
Journal:  J Bacteriol       Date:  2008-01-11       Impact factor: 3.490

7.  Evolutionary maintenance of selfish homing endonuclease genes in the absence of horizontal transfer.

Authors:  Koji Yahara; Masaki Fukuyo; Akira Sasaki; Ichizo Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-16       Impact factor: 11.205

Review 8.  Diverse functions of restriction-modification systems in addition to cellular defense.

Authors:  Kommireddy Vasu; Valakunja Nagaraja
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

Review 9.  Conflicts targeting epigenetic systems and their resolution by cell death: novel concepts for methyl-specific and other restriction systems.

Authors:  Ken Ishikawa; Eri Fukuda; Ichizo Kobayashi
Journal:  DNA Res       Date:  2010-11-08       Impact factor: 4.458

10.  Genome comparison and context analysis reveals putative mobile forms of restriction-modification systems and related rearrangements.

Authors:  Yoshikazu Furuta; Kentaro Abe; Ichizo Kobayashi
Journal:  Nucleic Acids Res       Date:  2010-01-12       Impact factor: 16.971

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