Literature DB >> 1629331

Absolute quantitation of viremia in human immunodeficiency virus infection by competitive reverse transcription and polymerase chain reaction.

S Menzo1, P Bagnarelli, M Giacca, A Manzin, P E Varaldo, M Clementi.   

Abstract

A competitive polymerase chain reaction (PCR)-based assay for the quantitative detection of human immunodeficiency virus type 1 (HIV-1) viremia was developed and optimized. This method consists of the reverse transcription and subsequent amplification in the same tube of two similar RNA templates, the wild-type template to be quantified and a known amount of the internally deleted synthetic template, both with identical primer recognition sites. The same strategy also proved to be useful in the quantitative assay of HIV-1-specific cellular transcripts and proviral DNA sequences from peripheral blood mononuclear cells by using competitor DNA. The method might be of interest in the study of the precise level of HIV-1 activity during the different clinical phases of the infection and in the simple, fast, and methodologically correct molecular investigation of patients treated with specific antiviral compounds.

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Year:  1992        PMID: 1629331      PMCID: PMC265375          DOI: 10.1128/jcm.30.7.1752-1757.1992

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  31 in total

Review 1.  The molecular biology of human immunodeficiency virus type 1 infection.

Authors:  W C Greene
Journal:  N Engl J Med       Date:  1991-01-31       Impact factor: 91.245

2.  Direct detection of HIV RNA expression in seropositive subjects.

Authors:  C Hart; G Schochetman; T Spira; A Lifson; J Moore; J Galphin; J Sninsky; C Y Ou
Journal:  Lancet       Date:  1988-09-10       Impact factor: 79.321

3.  Serological markers in early stages of human immunodeficiency virus infection in haemophiliacs.

Authors:  J P Allain; Y Laurian; D A Paul; D Senn
Journal:  Lancet       Date:  1986-11-29       Impact factor: 79.321

4.  Frequent detection of HIV-1-specific mRNAs in infected individuals suggests ongoing active viral expression in all stages of disease.

Authors:  S M Schnittman; J J Greenhouse; H C Lane; P F Pierce; A S Fauci
Journal:  AIDS Res Hum Retroviruses       Date:  1991-04       Impact factor: 2.205

5.  Absolute mRNA quantification using the polymerase chain reaction (PCR). A novel approach by a PCR aided transcript titration assay (PATTY).

Authors:  M Becker-André; K Hahlbrock
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

6.  Detection of human immunodeficiency virus type 1 genomic RNA in plasma samples by reverse-transcription polymerase chain reaction.

Authors:  P Bagnarelli; S Menzo; A Manzin; M Giacca; P E Varaldo; M Clementi
Journal:  J Med Virol       Date:  1991-06       Impact factor: 2.327

7.  Quantitative assessment of HIV-1 DNA load by coamplification of HIV-1 gag and HLA-DQ-alpha genes.

Authors:  T H Lee; F J Sunzeri; L H Tobler; B G Williams; M P Busch
Journal:  AIDS       Date:  1991-06       Impact factor: 4.177

8.  Competitive polymerase chain reaction assay for quantitation of HIV-1 DNA and RNA.

Authors:  M Stieger; C Démollière; L Ahlborn-Laake; J Mous
Journal:  J Virol Methods       Date:  1991 Sep-Oct       Impact factor: 2.014

9.  Rapid and sensitive viral culture method for human immunodeficiency virus type 1.

Authors:  J B Jackson; R W Coombs; K Sannerud; F S Rhame; H H Balfour
Journal:  J Clin Microbiol       Date:  1988-07       Impact factor: 5.948

10.  Detection, isolation, and continuous production of cytopathic retroviruses (HTLV-III) from patients with AIDS and pre-AIDS.

Authors:  M Popovic; M G Sarngadharan; E Read; R C Gallo
Journal:  Science       Date:  1984-05-04       Impact factor: 47.728

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  37 in total

Review 1.  Quantitative molecular analysis of virus expression and replication.

Authors:  M Clementi
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

Review 2.  Real-time PCR in virology.

Authors:  Ian M Mackay; Katherine E Arden; Andreas Nitsche
Journal:  Nucleic Acids Res       Date:  2002-03-15       Impact factor: 16.971

3.  Comparative quantification of human intestinal bacteria based on cPCR and LDR/LCR.

Authors:  Zhou-Rui Tang; Kai Li; Yu-Xun Zhou; Zhen-Xian Xiao; Jun-Hua Xiao; Rui Huang; Guo-Hao Gu
Journal:  World J Gastroenterol       Date:  2012-01-21       Impact factor: 5.742

4.  Dynamics of HIV-1 mRNA expression in patients with long-term nonprogressive HIV-1 infection.

Authors:  M Comar; C Simonelli; S Zanussi; P Paoli; E Vaccher; U Tirelli; M Giacca
Journal:  J Clin Invest       Date:  1997-08-15       Impact factor: 14.808

5.  Quantitation of Helicobacter pylori in dental plaque samples by competitive polymerase chain reaction.

Authors:  Q Song; B Haller; D Ulrich; A Wichelhaus; G Adler; G Bode
Journal:  J Clin Pathol       Date:  2000-03       Impact factor: 3.411

Review 6.  Clinical use of quantitative molecular methods in studying human immunodeficiency virus type 1 infection.

Authors:  M Clementi; S Menzo; P Bagnarelli; A Valenza; S Paolucci; R Sampaolesi; A Manzin; P E Varaldo
Journal:  Clin Microbiol Rev       Date:  1996-04       Impact factor: 26.132

7.  Quantitation of human immunodeficiency virus type 1 DNA forms with the second template switch in peripheral blood cells predicts disease progression independently of plasma RNA load.

Authors:  Leondios G Kostrikis; Giota Touloumi; Rose Karanicolas; Nikos Pantazis; Cleo Anastassopoulou; Anastasia Karafoulidou; James J Goedert; Angelos Hatzakis
Journal:  J Virol       Date:  2002-10       Impact factor: 5.103

8.  PCR for detection of rubella virus RNA in clinical samples.

Authors:  T J Bosma; K M Corbett; S O'Shea; J E Banatvala; J M Best
Journal:  J Clin Microbiol       Date:  1995-05       Impact factor: 5.948

9.  Tailing cDNAs with terminal deoxynucleotidyl transferase in RT-PCR assays to identify ribozyme cleavage products.

Authors:  J Albuquerque-Silva; S Houard; A Bollen
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

10.  Double-step PCR assay to quantify Epstein-Barr viral load in peripheral blood.

Authors:  Massimiliano Bergallo; Chiara Merlino; Roberta Daniele; Franca Sinesi; Mara Fumagalli; Alessandro Negro Ponzi; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2004-07       Impact factor: 2.695

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