Literature DB >> 16289024

cis-Regulatory inputs of the wnt8 gene in the sea urchin endomesoderm network.

Takuya Minokawa1, Athula H Wikramanayake, Eric H Davidson.   

Abstract

Expression of the wnt8 gene is the key transcriptional motivator of an intercellular signaling loop which drives endomesoderm specification forward early in sea urchin embryogenesis. This gene was predicted by network perturbation analysis to be activated by inputs from the blimp1/krox gene, itself expressed zygotically in the endomesoderm during cleavage; and by a Tcf1/beta-catenin input. The implication is that zygotic expression of wnt8 is stimulated in neighboring cells by its own gene product, since reception of the Wnt8 ligand causes beta-catenin nuclearization. Here, the modular cis-regulatory system of the wnt8 gene of Strongylocentrotus purpuratus was characterized functionally, and shown to respond to blockade of both Blimp1/Krox and Tcf1/beta-catenin inputs just as does the endogenous gene. The genomic target sites for these factors were demonstrated by mutation in one of the cis-regulatory modules. The Tcf1/beta-catenin and Blimp1/Krox inputs are both necessary for normal endomesodermal expression mediated by this cis-regulatory module; thus, the genomic regulatory code underlying the predicted signaling loop thus resides in the wnt8 cis-regulatory sequence. In a second regulatory region, which initiates expression in micromere and macromere descendant cells early in cleavage, Tcf1 sites act to repress ectopic transcription in prospective ectoderm cells.

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Year:  2005        PMID: 16289024     DOI: 10.1016/j.ydbio.2005.09.047

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  38 in total

Review 1.  RUNX1-dependent mechanisms in biological control and dysregulation in cancer.

Authors:  Deli Hong; Andrew J Fritz; Jonathan A Gordon; Coralee E Tye; Joseph R Boyd; Kirsten M Tracy; Seth E Frietze; Frances E Carr; Jeffrey A Nickerson; Andre J Van Wijnen; Anthony N Imbalzano; Sayyed K Zaidi; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2018-12-04       Impact factor: 6.384

2.  Information processing at the foxa node of the sea urchin endomesoderm specification network.

Authors:  Smadar Ben-Tabou de-Leon; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

3.  A spatially dynamic cohort of regulatory genes in the endomesodermal gene network of the sea urchin embryo.

Authors:  Joel Smith; Ebba Kraemer; Hongdau Liu; Christina Theodoris; Eric Davidson
Journal:  Dev Biol       Date:  2007-11-09       Impact factor: 3.582

4.  Exclusive developmental functions of gatae cis-regulatory modules in the Strongylocentrorus purpuratus embryo.

Authors:  Pei Yun Lee; Jongmin Nam; Eric H Davidson
Journal:  Dev Biol       Date:  2007-05-10       Impact factor: 3.582

5.  Cis-regulatory control of the nodal gene, initiator of the sea urchin oral ectoderm gene network.

Authors:  Jongmin Nam; Yi-Hsien Su; Pei Yun Lee; Anthony J Robertson; James A Coffman; Eric H Davidson
Journal:  Dev Biol       Date:  2007-03-28       Impact factor: 3.582

6.  A missing link in the sea urchin embryo gene regulatory network: hesC and the double-negative specification of micromeres.

Authors:  Roger Revilla-i-Domingo; Paola Oliveri; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-16       Impact factor: 11.205

Review 7.  Properties of developmental gene regulatory networks.

Authors:  Eric H Davidson; Michael S Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-22       Impact factor: 11.205

8.  Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo.

Authors:  Joel Smith; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-22       Impact factor: 11.205

9.  Developmental cis-regulatory analysis of the cyclin D gene in the sea urchin Strongylocentrotus purpuratus.

Authors:  Christopher M McCarty; James A Coffman
Journal:  Biochem Biophys Res Commun       Date:  2013-10-01       Impact factor: 3.575

10.  Blocking Dishevelled signaling in the noncanonical Wnt pathway in sea urchins disrupts endoderm formation and spiculogenesis, but not secondary mesoderm formation.

Authors:  Christine A Byrum; Ronghui Xu; Joanna M Bince; David R McClay; Athula H Wikramanayake
Journal:  Dev Dyn       Date:  2009-07       Impact factor: 3.780

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