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Literature DB >> 16284797

HCOP: the HGNC comparison of orthology predictions search tool.

Mathew W Wright¹, Tina A Eyre, Michael J Lush, Sue Povey, Elspeth A Bruford.

Abstract

The HGNC Comparison of Orthology Predictions search tool, HCOP (http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/hcop.pl ), enables users to compare predicted human and mouse orthologs for a specified gene, or set of genes, from either species according to the ortholog assertions from the Ensembl, HGNC, Homologene, Inparanoid, MGI and PhIGs databases. Users can assess the reliability of the prediction from the number of these different sources that identify a particular orthologous pair. HCOP provides a useful one-stop resource to summarise, compare and access various sources of human and mouse orthology data.

Entities: Chemical Species

Mesh：

Year: 2005 PMID： 16284797 DOI： 10.1007/s00335-005-0103-2

Source DB: PubMed Journal: Mamm Genome ISSN： 0938-8990 Impact factor: 2.957

8 in total

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Journal: Nucleic Acids Res Date: 2005-01-01 Impact factor: 16.971

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Journal: Nucleic Acids Res Date: 2005-01-01 Impact factor: 16.971

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Journal: Nucleic Acids Res Date: 2005-01-01 Impact factor: 16.971

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Authors: David L Wheeler; Tanya Barrett; Dennis A Benson; Stephen H Bryant; Kathi Canese; Deanna M Church; Michael DiCuccio; Ron Edgar; Scott Federhen; Wolfgang Helmberg; David L Kenton; Oleg Khovayko; David J Lipman; Thomas L Madden; Donna R Maglott; James Ostell; Joan U Pontius; Kim D Pruitt; Gregory D Schuler; Lynn M Schriml; Edwin Sequeira; Steven T Sherry; Karl Sirotkin; Grigory Starchenko; Tugba O Suzek; Roman Tatusov; Tatiana A Tatusova; Lukas Wagner; Eugene Yaschenko
Journal: Nucleic Acids Res Date: 2005-01-01 Impact factor: 16.971

8 in total

18 in total

1. Deconvoluting global cytokine signaling networks in natural killer cells.

Authors: Gabriela M Wiedemann; Endi K Santosa; Simon Grassmann; Sam Sheppard; Jean-Benoît Le Luduec; Nicholas M Adams; Celeste Dang; Katharine C Hsu; Joseph C Sun; Colleen M Lau
Journal: Nat Immunol Date: 2021-04-15 Impact factor: 25.606

2. Lymph node colonization induces tumor-immune tolerance to promote distant metastasis.

Authors: Nathan E Reticker-Flynn; Weiruo Zhang; Julia A Belk; Pamela A Basto; Nichole K Escalante; Genay O W Pilarowski; Alborz Bejnood; Maria M Martins; Justin A Kenkel; Ian L Linde; Sreya Bagchi; Robert Yuan; Serena Chang; Matthew H Spitzer; Yaron Carmi; Jiahan Cheng; Lorna L Tolentino; Okmi Choi; Nancy Wu; Christina S Kong; Andrew J Gentles; John B Sunwoo; Ansuman T Satpathy; Sylvia K Plevritis; Edgar G Engleman
Journal: Cell Date: 2022-05-06 Impact factor: 66.850

3. Identification of DHODH as a therapeutic target in small cell lung cancer.

Authors: Leanne Li; Sheng Rong Ng; Caterina I Colón; Benjamin J Drapkin; Peggy P Hsu; Zhaoqi Li; Christopher S Nabel; Caroline A Lewis; Rodrigo Romero; Kim L Mercer; Arjun Bhutkar; Sarah Phat; David T Myers; Mandar Deepak Muzumdar; Peter M K Westcott; Mary Clare Beytagh; Anna F Farago; Matthew G Vander Heiden; Nicholas J Dyson; Tyler Jacks
Journal: Sci Transl Med Date: 2019-11-06 Impact factor: 17.956

4. The Putative RNA-Binding Protein Dri1 Promotes the Loading of Kinesin-14/Klp2 to the Mitotic Spindle and Is Sequestered into Heat-Induced Protein Aggregates in Fission Yeast.

Authors: Masashi Yukawa; Mitsuki Ohishi; Yusuke Yamada; Takashi Toda
Journal: Int J Mol Sci Date: 2021-04-30 Impact factor: 5.923

5. An integrative approach to ortholog prediction for disease-focused and other functional studies.

Authors: Yanhui Hu; Ian Flockhart; Arunachalam Vinayagam; Clemens Bergwitz; Bonnie Berger; Norbert Perrimon; Stephanie E Mohr
Journal: BMC Bioinformatics Date: 2011-08-31 Impact factor: 3.169

6. Developing a community-based genetic nomenclature for anole lizards.

Authors: Kenro Kusumi; Rob J Kulathinal; Arhat Abzhanov; Stephane Boissinot; Nicholas G Crawford; Brant C Faircloth; Travis C Glenn; Daniel E Janes; Jonathan B Losos; Douglas B Menke; Steven Poe; Thomas J Sanger; Christopher J Schneider; Jessica Stapley; Juli Wade; Jeanne Wilson-Rawls
Journal: BMC Genomics Date: 2011-11-11 Impact factor: 3.969