Literature DB >> 16284275

A simple theoretical model explains dynein's response to load.

Yi Qin Gao1.   

Abstract

Recent experiment showed that cytoplasmic dynein 1, a molecular motor responsible for cargo transport in cells, functions as a gear in response to external load. In the presence of vanishing or small external load, dynein walks with 24- or 32-nm steps, whereas at high external load, its step size is reduced to 8 nm. A simple model is proposed to account for this property of dynein. The model assumes that the chemical energy of ATP hydrolysis is used through a loose coupling between the chemical reaction and the translocation of dynein along microtubule. This loose chemomechanical coupling is represented by the loosely coupled motions of dynein along two different reaction coordinates. The first reaction coordinate is tightly coupled to the chemical reaction and describes the protein conformational changes that control the chemical processes, including ATP binding and hydrolysis, and ADP-Pi release. The second coordinate describes the translocation of dynein along microtubule, which is directly subject to the influence of the external load. The model is used to explain the experimental data on the external force dependence of the dynein step size as well as the ATP concentration dependence of the stall force. A number of predictions, such as the external force dependence of speed of translocation, ATP hydrolysis rate, and dynein step sizes, are made based on this theoretical model. This model provides a simple understanding on how a variable chemomechanical coupling ratio can be achieved and used to optimize the biological function of dynein.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16284275      PMCID: PMC1367106          DOI: 10.1529/biophysj.105.073189

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  35 in total

1.  Inner-arm dynein c of Chlamydomonas flagella is a single-headed processive motor.

Authors:  H Sakakibara; H Kojima; Y Sakai; E Katayama; K Oiwa
Journal:  Nature       Date:  1999-08-05       Impact factor: 49.962

2.  Single kinesin molecules studied with a molecular force clamp.

Authors:  K Visscher; M J Schnitzer; S M Block
Journal:  Nature       Date:  1999-07-08       Impact factor: 49.962

3.  Dynein structure and power stroke.

Authors:  Stan A Burgess; Matt L Walker; Hitoshi Sakakibara; Peter J Knight; Kazuhiro Oiwa
Journal:  Nature       Date:  2003-02-13       Impact factor: 49.962

4.  Chemomechanical coupling of the forward and backward steps of single kinesin molecules.

Authors:  Masayoshi Nishiyama; Hideo Higuchi; Toshio Yanagida
Journal:  Nat Cell Biol       Date:  2002-10       Impact factor: 28.824

Review 5.  Molecular motors: Dynein's gearbox.

Authors:  R A Cross
Journal:  Curr Biol       Date:  2004-05-04       Impact factor: 10.834

6.  25 Angstrom resolution structure of a cytoplasmic dynein motor reveals a seven-member planar ring.

Authors:  Montserrat Samsó; Michael P Koonce
Journal:  J Mol Biol       Date:  2004-07-23       Impact factor: 5.469

7.  Slow ADP-dependent acceleration of microtubule translocation produced by an axonemal dynein.

Authors:  Kenji Kikushima; Toshiki Yagi; Ritsu Kamiya
Journal:  FEBS Lett       Date:  2004-04-09       Impact factor: 4.124

Review 8.  Is the dynein motor a winch?

Authors:  Stan A Burgess; Peter J Knight
Journal:  Curr Opin Struct Biol       Date:  2004-04       Impact factor: 6.809

9.  Cytoplasmic dynein functions as a gear in response to load.

Authors:  Roop Mallik; Brian C Carter; Stephanie A Lex; Stephen J King; Steven P Gross
Journal:  Nature       Date:  2004-02-12       Impact factor: 49.962

Review 10.  Recent progress in dynein structure and mechanism.

Authors:  Kazuhiro Oiwa; Hitoshi Sakakibara
Journal:  Curr Opin Cell Biol       Date:  2005-02       Impact factor: 8.382

View more
  14 in total

1.  Cargo distributions differentiate pathological axonal transport impairments.

Authors:  Cassie S Mitchell; Robert H Lee
Journal:  J Theor Biol       Date:  2012-01-25       Impact factor: 2.691

2.  On the hand-over-hand mechanism of kinesin.

Authors:  Qiang Shao; Yi Qin Gao
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

3.  A physical explanation of the temperature dependence of physiological processes mediated by cilia and flagella.

Authors:  Stuart Humphries
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

4.  Axonal transport cargo motor count versus average transport velocity: is fast versus slow transport really single versus multiple motor transport?

Authors:  Robert H Lee; Cassie S Mitchell
Journal:  J Theor Biol       Date:  2015-01-20       Impact factor: 2.691

5.  Dynamic catch-bonding generates the large stall forces of cytoplasmic dynein.

Authors:  Christopher M Johnson; J Daniel Fenn; Anthony Brown; P Jung
Journal:  Phys Biol       Date:  2020-06-19       Impact factor: 2.583

6.  The winch model can explain both coordinated and uncoordinated stepping of cytoplasmic dynein.

Authors:  Andreja Šarlah; Andrej Vilfan
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

7.  How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling.

Authors:  Shintaroh Kubo; Tomohiro Shima; Shoji Takada
Journal:  Biophys J       Date:  2020-03-29       Impact factor: 4.033

8.  Flexible light-chain and helical structure of F-actin explain the movement and step size of myosin-VI.

Authors:  Ganhui Lan; Sean X Sun
Journal:  Biophys J       Date:  2006-09-08       Impact factor: 4.033

9.  [Yeast chaperone Hspl04 regulates gene expression on the posttranscriptional level].

Authors:  A A Rubel'; A F Saĭfitdinova; A G Lada; A A Nizhnikov; S G Inge-Vechtomov; A P Galkin
Journal:  Mol Biol (Mosk)       Date:  2008 Jan-Feb

10.  Optimal cytoplasmic transport in viral infections.

Authors:  Maria R D'Orsogna; Tom Chou
Journal:  PLoS One       Date:  2009-12-30       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.