Literature DB >> 16283145

Targeting protein-protein interactions for cancer therapy.

David C Fry1, Lyubomir T Vassilev.   

Abstract

An increasing number of protein-protein interactions have been identified as potential intervention points for the development of anticancer agents. However, such systems have historically been considered high-risk targets due to the relatively large interaction surfaces involved in protein-protein binding. This characterization has to be reexamined as progress has been made recently in identifying small-molecule inhibitors of several protein-protein systems in oncology including the p53-MDM2 interaction. This review presents a survey of protein-protein interactions that have been identified as potential oncology targets and evaluates their attractiveness in terms of drug discovery. The analysis focuses primarily on the structural characteristics of the participating binding sites, particularly the dimensions of the sites. Known ligands are also examined, especially with regard to their druglikeness.

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Year:  2005        PMID: 16283145     DOI: 10.1007/s00109-005-0705-x

Source DB:  PubMed          Journal:  J Mol Med (Berl)        ISSN: 0946-2716            Impact factor:   4.599


  34 in total

1.  Crystal structure of an Eph receptor-ephrin complex.

Authors:  J P Himanen; K R Rajashankar; M Lackmann; C A Cowan; M Henkemeyer; D B Nikolov
Journal:  Nature       Date:  2001 Dec 20-27       Impact factor: 49.962

2.  Structure of the Bcr-Abl oncoprotein oligomerization domain.

Authors:  Xun Zhao; Saghi Ghaffari; Harvey Lodish; Vladimir N Malashkevich; Peter S Kim
Journal:  Nat Struct Biol       Date:  2002-02

Review 3.  Small-molecule inhibitors of protein-protein interactions: progressing towards the dream.

Authors:  Michelle R Arkin; James A Wells
Journal:  Nat Rev Drug Discov       Date:  2004-04       Impact factor: 84.694

4.  Discovery of small-molecule inhibitors of Bcl-2 through structure-based computer screening.

Authors:  I J Enyedy; Y Ling; K Nacro; Y Tomita; X Wu; Y Cao; R Guo; B Li; X Zhu; Y Huang; Y Q Long; P P Roller; D Yang; S Wang
Journal:  J Med Chem       Date:  2001-12-06       Impact factor: 7.446

5.  Crystal structure of a beta-catenin/Tcf complex.

Authors:  T A Graham; C Weaver; F Mao; D Kimelman; W Xu
Journal:  Cell       Date:  2000-12-08       Impact factor: 41.582

6.  Structural basis for binding of Smac/DIABLO to the XIAP BIR3 domain.

Authors:  Z Liu; C Sun; E T Olejniczak; R P Meadows; S F Betz; T Oost; J Herrmann; J C Wu; S W Fesik
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

7.  Structural basis for Hif-1 alpha /CBP recognition in the cellular hypoxic response.

Authors:  Sonja A Dames; Maria Martinez-Yamout; Roberto N De Guzman; H Jane Dyson; Peter E Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

8.  Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF ubiquitin ligase complex.

Authors:  Ning Zheng; Brenda A Schulman; Langzhou Song; Julie J Miller; Philip D Jeffrey; Ping Wang; Claire Chu; Deanna M Koepp; Stephen J Elledge; Michele Pagano; Ronald C Conaway; Joan W Conaway; J Wade Harper; Nikola P Pavletich
Journal:  Nature       Date:  2002-04-18       Impact factor: 49.962

9.  Identification and characterization of small molecule inhibitors of the calcium-dependent S100B-p53 tumor suppressor interaction.

Authors:  Joseph Markowitz; Ijen Chen; Rossi Gitti; Donna M Baldisseri; Yongping Pan; Ryan Udan; France Carrier; Alexander D MacKerell; David J Weber
Journal:  J Med Chem       Date:  2004-10-07       Impact factor: 7.446

10.  Crystal structures of the human p56lck SH2 domain in complex with two short phosphotyrosyl peptides at 1.0 A and 1.8 A resolution.

Authors:  L Tong; T C Warren; J King; R Betageri; J Rose; S Jakes
Journal:  J Mol Biol       Date:  1996-03-01       Impact factor: 5.469

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  41 in total

Review 1.  Targeting Eph receptors with peptides and small molecules: progress and challenges.

Authors:  Roberta Noberini; Ilaria Lamberto; Elena B Pasquale
Journal:  Semin Cell Dev Biol       Date:  2011-10-25       Impact factor: 7.727

Review 2.  Chemistry and biology of multicomponent reactions.

Authors:  Alexander Dömling; Wei Wang; Kan Wang
Journal:  Chem Rev       Date:  2012-03-22       Impact factor: 60.622

3.  Computational alanine scanning with linear scaling semiempirical quantum mechanical methods.

Authors:  David J Diller; Christine Humblet; Xiaohua Zhang; Lance M Westerhoff
Journal:  Proteins       Date:  2010-08-01

Review 4.  Ligand discovery and virtual screening using the program LIDAEUS.

Authors:  P Taylor; E Blackburn; Y G Sheng; S Harding; K-Y Hsin; D Kan; S Shave; M D Walkinshaw
Journal:  Br J Pharmacol       Date:  2007-11-26       Impact factor: 8.739

5.  Mining alpha-helix-forming molecular recognition features with cross species sequence alignments.

Authors:  Yugong Cheng; Christopher J Oldfield; Jingwei Meng; Pedro Romero; Vladimir N Uversky; A Keith Dunker
Journal:  Biochemistry       Date:  2007-11-01       Impact factor: 3.162

6.  Detecting protein-protein interactions in living cells: development of a bioluminescence resonance energy transfer assay to evaluate the PSD-95/NMDA receptor interaction.

Authors:  Marie Gottschalk; Anders Bach; Jakob Lerche Hansen; Povl Krogsgaard-Larsen; Anders S Kristensen; Kristian Strømgaard
Journal:  Neurochem Res       Date:  2009-06-04       Impact factor: 3.996

7.  Small molecules can selectively inhibit ephrin binding to the EphA4 and EphA2 receptors.

Authors:  Roberta Noberini; Mitchell Koolpe; Satyamaheshwar Peddibhotla; Russell Dahl; Ying Su; Nicholas D P Cosford; Gregory P Roth; Elena B Pasquale
Journal:  J Biol Chem       Date:  2008-08-26       Impact factor: 5.157

8.  Mechanism of CDK5 activation revealed by steered molecular dynamics simulations and energy calculations.

Authors:  Bing Zhang; Zhou Cheng Su; Tong Earn Tay; Vincent B C Tan
Journal:  J Mol Model       Date:  2009-12-15       Impact factor: 1.810

Review 9.  Cell-cell signaling via Eph receptors and ephrins.

Authors:  Juha-Pekka Himanen; Nayanendu Saha; Dimitar B Nikolov
Journal:  Curr Opin Cell Biol       Date:  2007-10-24       Impact factor: 8.382

10.  Design, synthesis and characterization of novel small molecular inhibitors of ephrin-B2 binding to EphB4.

Authors:  Srinivas Duggineni; Sayantan Mitra; Roberta Noberini; Xiaofeng Han; Nan Lin; Yan Xu; Wang Tian; Jing An; Elena B Pasquale; Ziwei Huang
Journal:  Biochem Pharmacol       Date:  2012-12-17       Impact factor: 5.858

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