Literature DB >> 16283121

Prediction of toxicity using a novel RBF neural network training methodology.

Georgia Melagraki1, Antreas Afantitis, Kalliopi Makridima, Haralambos Sarimveis, Olga Igglessi-Markopoulou.   

Abstract

A neural network methodology based on the radial basis function (RBF) architecture is introduced in order to establish quantitative structure-toxicity relationship models for the prediction of toxicity. The dataset used consists of 221 phenols and their corresponding toxicity values to Tetrahymena pyriformis. Physicochemical parameters and molecular descriptors are used to provide input information to the models. The performance and predictive abilities of the RBF models are compared to standard multiple linear regression (MLR) models. The leave-one-out cross validation procedure and validation through an external test set produce statistically significant R2 and RMS values for the RBF models, which prove considerably more accurate than the MLR models. [Figure: see text].

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Year:  2005        PMID: 16283121     DOI: 10.1007/s00894-005-0032-8

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  7 in total

1.  Structure-toxicity relationships study of a series of organophosphorus insecticides.

Authors:  Mohamed Zahouily; Abdallah Rhihil; Halima Bazoui; Saïd Sebti; Driss Zakarya
Journal:  J Mol Model       Date:  2002-05       Impact factor: 1.810

2.  Partial least squares modelling of the acute toxicity of aliphatic compounds to Tetrahymena pyriformis.

Authors:  T I Netzeva; T W Schultz; A O Aptula; M T D Cronin
Journal:  SAR QSAR Environ Res       Date:  2003-08       Impact factor: 3.000

3.  QSARS for toxicity to the bacterium Sinorhizobium meliloti.

Authors:  I Lessigiarska; M T D Cronin; A P Worth; J C Dearden; T I Netzeva
Journal:  SAR QSAR Environ Res       Date:  2004-06       Impact factor: 3.000

4.  Linear versus nonlinear QSAR modeling of the toxicity of phenol derivatives to Tetrahymena pyriformis.

Authors:  J Devillers
Journal:  SAR QSAR Environ Res       Date:  2004-08       Impact factor: 3.000

5.  Comparative assessment of methods to develop QSARs for the prediction of the toxicity of phenols to Tetrahymena pyriformis.

Authors:  Mark T D Cronin; Aynur O Aptula; Judith C Duffy; Tatiana I Netzeva; Philip H Rowe; Iva V Valkova; T Wayne Schultz
Journal:  Chemosphere       Date:  2002-12       Impact factor: 7.086

6.  Selection of data sets for QSARs: analyses of Tetrahymena toxicity from aromatic compounds.

Authors:  T W Schultz; T I Netzeva; M T D Cronin
Journal:  SAR QSAR Environ Res       Date:  2003-02       Impact factor: 3.000

7.  Ecotoxicity prediction using mechanism- and non-mechanism-based QSARs: a preliminary study.

Authors:  Shijin Ren
Journal:  Chemosphere       Date:  2003-12       Impact factor: 7.086

  7 in total
  4 in total

1.  Predictive QSAR workflow for the in silico identification and screening of novel HDAC inhibitors.

Authors:  Georgia Melagraki; Antreas Afantitis; Haralambos Sarimveis; Panayiotis A Koutentis; George Kollias; Olga Igglessi-Markopoulou
Journal:  Mol Divers       Date:  2009-02-10       Impact factor: 2.943

2.  A novel QSPR model for predicting θ (lower critical solution temperature) in polymer solutions using molecular descriptors.

Authors:  Georgia Melagraki; Antreas Afantitis; Haralambos Sarimveis; Panayiotis A Koutentis; John Markopoulos; Olga Igglessi-Markopoulou
Journal:  J Mol Model       Date:  2007       Impact factor: 1.810

3.  QSAR models for CXCR2 receptor antagonists based on the genetic algorithm for data preprocessing prior to application of the PLS linear regression method and design of the new compounds using in silico virtual screening.

Authors:  Tahereh Asadollahi; Shayessteh Dadfarnia; Ali Mohammad Haji Shabani; Jahan B Ghasemi; Maryam Sarkhosh
Journal:  Molecules       Date:  2011-02-25       Impact factor: 4.411

4.  A Study of Feature Construction Based on Least Squares and RBF Neural Networks in Sports Training Behaviour Prediction.

Authors:  Chunyan Qiu; Changhong Su; Xiaoxiao Liu; Dian Yu
Journal:  Comput Intell Neurosci       Date:  2022-03-07
  4 in total

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