Literature DB >> 16282167

Mosaics of convergences and noise in morphological phylogenies: what's in a viverrid-like carnivoran?

Philippe Gaubert1, W Chris Wozencraft, Pedro Cordeiro-Estrela, Géraldine Veron.   

Abstract

Adaptive convergence in morphological characters has not been thoroughly investigated, and the processes by which phylogenetic relationships may be misled by morphological convergence remains unclear. We undertook a case study on the morphological evolution of viverrid-like feliformians (Nandinia, Cryptoprocta, Fossa, Eupleres, Prionodon) and built the largest morphological matrix concerning the suborder Feliformia to date. A total of 349 characters grouped into four anatomical partitions were used for all species of Viverridae and viverrid-like taxa plus representatives of the Felidae, Hyaenidae, Herpestidae, and one Malagasy mongoose. Recent molecular phylogenetic analyses suggest that viverrid-like morphotypes appeared independently at least three times during feliformian evolution. We thus used a synthetic molecular tree to assess morphological evolutionary patterns characterizing the viverrid-like taxa. We examined phylogenetic signal, convergence and noise in morphological characters using (a) tree-length distribution (g1), (b) partitioned Bremer support, (c) RI values and their distribution, (d) respective contributions of diagnostic synapomorphies at the nodes for each partition, (e) patterns of shared convergences among viverrid-like taxa and other feliformian lineages, (f) tree-length differences among alternative hypotheses, and (g) the successive removal of convergent character states from the original matrix. In addition, the lability of complex morphological structures was assessed by mapping them onto the synthetic molecular tree. The unconstrained morphological analysis yielded phylogenetic groupings that closely reflected traditional classification. The use of a synthetic molecular tree (constraint) combined with our thorough morphological investigations revealed the mosaics of convergences likely to have contributed to part of the historical uncertainty over viverrid classification. It also showed that complex morphological structures could be subjected to reversible evolutionary trends. The morphological matrix proved useful in characterizing several feliformian clades with diagnostic synapomorphies. These results support the removal from the traditionally held Viverridae of several viverrid-like taxa into three distinct families: Nandiniidae (Nandinia), Prionodontidae (Prionodon), and the newly defined Eupleridae (including Cryptoprocta, Fossa, Eupleres plus all "mongoose-like" Malagasy taxa). No clearly "phylogenetically misleading" data subsets could be identified, and the great majority of morphological convergences appeared to be nonadaptive. The multiple approaches used in this study revealed that the most disruptive element with regards to morphological phylogenetic reconstruction was noise, which blured the expression of phylogenetic signal. This study demonstrates the crucial need to consider independent (molecular) phylogenies in order to produce reliable evolutionary hypotheses and should promote a new approach to the definition of morphological characters in mammals. [Constrained analysis; convergence; evolutionary scenario; Feliformia; morphology; noise; phylogenetic signal; phylogeny; Viverridae.].

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Year:  2005        PMID: 16282167     DOI: 10.1080/10635150500232769

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  11 in total

1.  Combined Analysis of Extant Rhynchonellida (Brachiopoda) using Morphological and Molecular Data.

Authors:  David W Bapst; Holly A Schreiber; Sandra J Carlson
Journal:  Syst Biol       Date:  2018-01-01       Impact factor: 15.683

2.  Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences.

Authors:  Eduardo Eizirik; William J Murphy; Klaus-Peter Koepfli; Warren E Johnson; Jerry W Dragoo; Robert K Wayne; Stephen J O'Brien
Journal:  Mol Phylogenet Evol       Date:  2010-02-04       Impact factor: 4.286

3.  Incomplete lineage sorting and phenotypic evolution in marsupials.

Authors:  Shaohong Feng; Ming Bai; Iker Rivas-González; Cai Li; Shiping Liu; Yijie Tong; Haidong Yang; Guangji Chen; Duo Xie; Karen E Sears; Lida M Franco; Juan Diego Gaitan-Espitia; Roberto F Nespolo; Warren E Johnson; Huanming Yang; Parice A Brandies; Carolyn J Hogg; Katherine Belov; Marilyn B Renfree; Kristofer M Helgen; Jacobus J Boomsma; Mikkel Heide Schierup; Guojie Zhang
Journal:  Cell       Date:  2022-04-20       Impact factor: 66.850

Review 4.  Understanding phylogenetic incongruence: lessons from phyllostomid bats.

Authors:  Liliana M Dávalos; Andrea L Cirranello; Jonathan H Geisler; Nancy B Simmons
Journal:  Biol Rev Camb Philos Soc       Date:  2012-08-14

5.  Dental Data Perform Relatively Poorly in Reconstructing Mammal Phylogenies: Morphological Partitions Evaluated with Molecular Benchmarks.

Authors:  Robert S Sansom; Matthew Albion Wills; Tamara Williams
Journal:  Syst Biol       Date:  2017-09-01       Impact factor: 9.160

6.  A new basal caniform (Mammalia: Carnivora) from the middle Eocene of North America and remarks on the phylogeny of early carnivorans.

Authors:  Susumu Tomiya
Journal:  PLoS One       Date:  2011-09-14       Impact factor: 3.240

7.  Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates.

Authors:  Katrin Nyakatura; Olaf R P Bininda-Emonds
Journal:  BMC Biol       Date:  2012-02-27       Impact factor: 7.431

8.  Morphological and molecular convergences in mammalian phylogenetics.

Authors:  Zhengting Zou; Jianzhi Zhang
Journal:  Nat Commun       Date:  2016-09-02       Impact factor: 14.919

9.  Whence the beardogs? Reappraisal of the Middle to Late Eocene 'Miacis' from Texas, USA, and the origin of Amphicyonidae (Mammalia, Carnivora).

Authors:  Susumu Tomiya; Zhijie Jack Tseng
Journal:  R Soc Open Sci       Date:  2016-10-12       Impact factor: 2.963

10.  A reexamination of the Carnivora malleus (Mammalia, Placentalia).

Authors:  John R Wible; Michelle Spaulding
Journal:  PLoS One       Date:  2012-11-27       Impact factor: 3.240

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