Literature DB >> 16280494

Methylosarcina lacus sp. nov., a methanotroph from Lake Washington, Seattle, USA, and emended description of the genus Methylosarcina.

Marina G Kalyuzhnaya1, Sergey M Stolyar2, Ann J Auman3, Jimmie C Lara4, Mary E Lidstrom4,1, Ludmila Chistoserdova1.   

Abstract

An obligately methanotrophic bacterial strain, LW14T, isolated from the sediment of Lake Washington, Seattle, USA, is described taxonomically. The isolate is an aerobic, Gram-negative, non-motile bacterium capable of growth on methane, and possesses type I intracytoplasmic membranes (i.e. it is a type I methanotroph). The strain possesses particulate methane monooxygenase (MMO) and has no soluble MMO. Formaldehyde is assimilated via the ribulose monophosphate cycle. The isolate grows within a pH range of 4-8, with the optimum between pH 5.5 and 6.5. The cellular fatty acid profile is dominated by C(16 : )omega18c, C(16 : 1)omega7c and C(16 : 1)omega5t fatty acids. The DNA G+C content is 53.3+/-0.4 mol%. On the basis of sequence analysis of the 16S rRNA gene, isolate LW14T is related most closely to representatives of the genus Methylosarcina. However, DNA-DNA hybridization analysis reveals only a distant relationship between isolate LW14T and the previously described Methylosarcina species. On the basis of its phenotypic and genotypic characteristics, LW14T represents a novel species of the genus Methylosarcina, for which the name Methylosarcina lacus sp. nov. is proposed, with LW14T (=ATCC BAA-1047T=JCM 13284T) as the type strain.

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Year:  2005        PMID: 16280494     DOI: 10.1099/ijs.0.63405-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

1.  Influence of nutrients on oxidation of low level methane by mixed methanotrophic consortia.

Authors:  Obulisamy Parthiba Karthikeyan; Karthigeyan Chidambarampadmavathy; Saravanan Nadarajan; Kirsten Heimann
Journal:  Environ Sci Pollut Res Int       Date:  2016-02-11       Impact factor: 4.223

2.  Bacterial populations active in metabolism of C1 compounds in the sediment of Lake Washington, a freshwater lake.

Authors:  Olivier Nercessian; Emma Noyes; Marina G Kalyuzhnaya; Mary E Lidstrom; Ludmila Chistoserdova
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

Review 3.  Methylotrophy in a lake: from metagenomics to single-organism physiology.

Authors:  Ludmila Chistoserdova
Journal:  Appl Environ Microbiol       Date:  2011-05-27       Impact factor: 4.792

4.  One millimetre makes the difference: high-resolution analysis of methane-oxidizing bacteria and their specific activity at the oxic-anoxic interface in a flooded paddy soil.

Authors:  Andreas Reim; Claudia Lüke; Sascha Krause; Jennifer Pratscher; Peter Frenzel
Journal:  ISME J       Date:  2012-06-14       Impact factor: 10.302

5.  The Microbial Ferrous Wheel in a Neutral pH Groundwater Seep.

Authors:  Eric E Roden; Joyce M McBeth; Marco Blöthe; Elizabeth M Percak-Dennett; Emily J Fleming; Rebecca R Holyoke; George W Luther; David Emerson; Juergen Schieber
Journal:  Front Microbiol       Date:  2012-05-22       Impact factor: 5.640

6.  Oxygen availability is a major factor in determining the composition of microbial communities involved in methane oxidation.

Authors:  Maria E Hernandez; David A C Beck; Mary E Lidstrom; Ludmila Chistoserdova
Journal:  PeerJ       Date:  2015-02-24       Impact factor: 2.984

Review 7.  Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker.

Authors:  Claudia Knief
Journal:  Front Microbiol       Date:  2015-12-15       Impact factor: 5.640

8.  Aquatic plant surface as a niche for methanotrophs.

Authors:  Naoko Yoshida; Hiroyuki Iguchi; Hiroya Yurimoto; Akio Murakami; Yasuyoshi Sakai
Journal:  Front Microbiol       Date:  2014-02-03       Impact factor: 5.640

9.  Draft genome sequences of gammaproteobacterial methanotrophs isolated from lake washington sediment.

Authors:  Marina G Kalyuzhnaya; Andrew E Lamb; Tami L McTaggart; Igor Y Oshkin; Nicole Shapiro; Tanja Woyke; Ludmila Chistoserdova
Journal:  Genome Announc       Date:  2015-03-12

10.  Sterol Synthesis in Diverse Bacteria.

Authors:  Jeremy H Wei; Xinchi Yin; Paula V Welander
Journal:  Front Microbiol       Date:  2016-06-24       Impact factor: 5.640

  10 in total

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