Literature DB >> 16277531

Electron inventory, kinetic assignment (E(n)), structure, and bonding of nitrogenase turnover intermediates with C2H2 and CO.

Hong-In Lee1, Morten Sørlie, Jason Christiansen, Tran-Chin Yang, Junlong Shao, Dennis R Dean, Brian J Hales, Brian M Hoffman.   

Abstract

Improved 1H ENDOR data from the S(EPR1) intermediate formed during turnover of the nitrogenase alpha-195Gln MoFe protein with C2(1,2)H2 in (1,2)H2O buffers, taken in context with the recent study of the intermediate formed from propargyl alcohol, indicate that S(EPR1) is a product complex, likely with C2H4 bound as a ferracycle to a single Fe of the FeMo-cofactor active site. 35 GHz CW and Mims pulsed 57Fe ENDOR of 57Fe-enriched S(EPR1) cofactor indicates that it exhibits the same valencies as those of the CO-bound cofactor of the lo-CO intermediate formed during turnover with CO, [Mo4+, Fe3+, Fe6(2+), S9(2-)(d43)](+1), reduced by m = 2 electrons relative to the resting-state cofactor. Consideration of 57Fe hyperfine coupling in S(EPR1) and lo-CO leads to a picture in which CO bridges two Fe of lo-CO, while the C2H4 of S(EPR1) binds to one of these. To correlate these and other intermediates with Lowe-Thorneley (LT) kinetic schemes for substrate reduction, we introduce the concept of an "electron inventory". It partitions the number of electrons a MoFe protein intermediate has accepted from the Fe protein (n) into the number transmitted to the substrate (s), the number that remain on the intermediate cofactor (m), and the additional number delivered to the cofactor from the P clusters (p): n = m + s - p (with p = 0 here). The cofactors of lo-CO and S(EPR1) both are reduced by m = 2 electrons, but the intermediates are not at the same LT reduction stage (E(n)): (n = 2; m = 2, s = 0) for lo-CO; (n = 4; s = 2, m = 2) for S(EPR1). This is the first proposed correlation of an LT E(n) kinetic state with a well-defined chemical state of the enzyme.

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Year:  2005        PMID: 16277531     DOI: 10.1021/ja054078x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  32 in total

1.  Combining steady-state and dynamic methods for determining absolute signs of hyperfine interactions: pulsed ENDOR Saturation and Recovery (PESTRE).

Authors:  Peter E Doan
Journal:  J Magn Reson       Date:  2010-10-14       Impact factor: 2.229

2.  Uncoupling binding of substrate CO from turnover by vanadium nitrogenase.

Authors:  Chi Chung Lee; Aaron W Fay; Tsu-Chien Weng; Courtney M Krest; Britt Hedman; Keith O Hodgson; Yilin Hu; Markus W Ribbe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-29       Impact factor: 11.205

3.  Bioorganometallic mechanism of action, and inhibition, of IspH.

Authors:  Weixue Wang; Ke Wang; Yi-Liang Liu; Joo-Hwan No; Jikun Li; Mark J Nilges; Eric Oldfield
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-19       Impact factor: 11.205

4.  Connecting nitrogenase intermediates with the kinetic scheme for N2 reduction by a relaxation protocol and identification of the N2 binding state.

Authors:  Dmitriy Lukoyanov; Brett M Barney; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-24       Impact factor: 11.205

5.  Evaluation of the Catalytic Relevance of the CO-Bound States of V-Nitrogenase.

Authors:  Chi Chung Lee; Jarett Wilcoxen; Caleb J Hiller; R David Britt; Yilin Hu
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-01       Impact factor: 15.336

6.  Ligand-bound S = 1/2 FeMo-cofactor of nitrogenase: hyperfine interaction analysis and implication for the central ligand X identity.

Authors:  Vladimir Pelmenschikov; David A Case; Louis Noodleman
Journal:  Inorg Chem       Date:  2008-06-26       Impact factor: 5.165

7.  57Fe ENDOR spectroscopy and 'electron inventory' analysis of the nitrogenase E4 intermediate suggest the metal-ion core of FeMo-cofactor cycles through only one redox couple.

Authors:  Peter E Doan; Joshua Telser; Brett M Barney; Robert Y Igarashi; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2011-10-07       Impact factor: 15.419

Review 8.  Reduction of Substrates by Nitrogenases.

Authors:  Lance C Seefeldt; Zhi-Yong Yang; Dmitriy A Lukoyanov; Derek F Harris; Dennis R Dean; Simone Raugei; Brian M Hoffman
Journal:  Chem Rev       Date:  2020-03-16       Impact factor: 60.622

Review 9.  Electron transfer in nitrogenase catalysis.

Authors:  Lance C Seefeldt; Brian M Hoffman; Dennis R Dean
Journal:  Curr Opin Chem Biol       Date:  2012-03-05       Impact factor: 8.822

Review 10.  Nitrogenase reduction of carbon-containing compounds.

Authors:  Lance C Seefeldt; Zhi-Yong Yang; Simon Duval; Dennis R Dean
Journal:  Biochim Biophys Acta       Date:  2013-04-16
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