Literature DB >> 16272516

Use of a real-time PCR TaqMan assay for rapid identification and differentiation of Burkholderia pseudomallei and Burkholderia mallei.

Jana M U'Ren1, Matthew N Van Ert, James M Schupp, W Ryan Easterday, Tatum S Simonson, Richard T Okinaka, Talima Pearson, Paul Keim.   

Abstract

A TaqMan allelic-discrimination assay designed around a synonymous single-nucleotide polymorphism was used to genotype Burkholderia pseudomallei and Burkholderia mallei isolates. The assay rapidly identifies and discriminates between these two highly pathogenic bacteria and does not cross-react with genetic near neighbors, such as Burkholderia thailandensis and Burkholderia cepacia.

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Year:  2005        PMID： 16272516      PMCID： PMC1287822          DOI： 10.1128/JCM.43.11.5771-5774.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  17 in total

1.  Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei.

Authors:  Matthew T G Holden; Richard W Titball; Sharon J Peacock; Ana M Cerdeño-Tárraga; Timothy Atkins; Lisa C Crossman; Tyrone Pitt; Carol Churcher; Karen Mungall; Stephen D Bentley; Mohammed Sebaihia; Nicholas R Thomson; Nathalie Bason; Ifor R Beacham; Karen Brooks; Katherine A Brown; Nat F Brown; Greg L Challis; Inna Cherevach; Tracy Chillingworth; Ann Cronin; Ben Crossett; Paul Davis; David DeShazer; Theresa Feltwell; Audrey Fraser; Zahra Hance; Heidi Hauser; Simon Holroyd; Kay Jagels; Karen E Keith; Mark Maddison; Sharon Moule; Claire Price; Michael A Quail; Ester Rabbinowitsch; Kim Rutherford; Mandy Sanders; Mark Simmonds; Sirirurg Songsivilai; Kim Stevens; Sarinna Tumapa; Monkgol Vesaratchavest; Sally Whitehead; Corin Yeats; Bart G Barrell; Petra C F Oyston; Julian Parkhill
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

2.  The eradication of glanders in Canada.

Authors:  J Brian Derbyshire
Journal:  Can Vet J       Date:  2002-09       Impact factor: 1.008

Review 3.  Melioidosis: epidemiology, pathophysiology, and management.

Authors:  Allen C Cheng; Bart J Currie
Journal:  Clin Microbiol Rev       Date:  2005-04       Impact factor: 26.132

Review 4.  A review on melioidosis with special respect on molecular and immunological diagnostic techniques.

Authors:  G Zysk; W D Splettstösser; H Neubauer
Journal:  Clin Lab       Date:  2000       Impact factor: 1.138

5.  Genome-wide comparison reveals great inter- and intraspecies variability in B. pseudomallei and B. mallei pathogens.

Authors:  Galina Monastyrskaya; Alexey Fushan; Igor Abaev; Olga Filyukova; Maria Kostina; Emily Pecherskih; Eugene Sverdlov
Journal:  Res Microbiol       Date:  2004-11       Impact factor: 3.992

Review 6.  Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales.

Authors:  Paul Keim; Matthew N Van Ert; Talima Pearson; Amy J Vogler; Lynn Y Huynh; David M Wagner
Journal:  Infect Genet Evol       Date:  2004-09       Impact factor: 3.342

7.  Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing.

Authors:  Talima Pearson; Joseph D Busch; Jacques Ravel; Timothy D Read; Shane D Rhoton; Jana M U'Ren; Tatum S Simonson; Sergey M Kachur; Rebecca R Leadem; Michelle L Cardon; Matthew N Van Ert; Lynn Y Huynh; Claire M Fraser; Paul Keim
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-03       Impact factor: 11.205

Review 8.  Melioidosis.

Authors:  N J White
Journal:  Lancet       Date:  2003-05-17       Impact factor: 79.321

9.  Enzyme-linked immunosorbent assay for the diagnosis of clinical and subclinical melioidosis.

Authors:  L R Ashdown; R W Johnson; J M Koehler; C A Cooney
Journal:  J Infect Dis       Date:  1989-08       Impact factor: 5.226

10.  Use of 16S rRNA gene sequencing for rapid identification and differentiation of Burkholderia pseudomallei and B. mallei.

Authors:  Jay E Gee; Claudio T Sacchi; Mindy B Glass; Barun K De; Robbin S Weyant; Paul N Levett; Anne M Whitney; Alex R Hoffmaster; Tanja Popovic
Journal:  J Clin Microbiol       Date:  2003-10       Impact factor: 5.948
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  22 in total

1.  Identification of Burkholderia pseudomallei and related bacteria by multiple-locus sequence typing-derived PCR and real-time PCR.

Authors:  Pierre Wattiau; Mieke Van Hessche; Heinrich Neubauer; Reena Zachariah; Ulrich Wernery; Hein Imberechts
Journal:  J Clin Microbiol       Date:  2007-01-24       Impact factor: 5.948

2.  Real-time PCR assays of single-nucleotide polymorphisms defining the major Brucella clades.

Authors:  Jeffrey T Foster; Richard T Okinaka; Rita Svensson; Kathryn Shaw; Barun K De; Richard A Robison; William S Probert; Leo J Kenefic; William D Brown; Paul Keim
Journal:  J Clin Microbiol       Date:  2007-11-21       Impact factor: 5.948

3.  Fine-scale genetic diversity among Burkholderia pseudomallei soil isolates in northeast Thailand.

Authors:  Jana M U'ren; Heidie Hornstra; Talima Pearson; James M Schupp; Benjamin Leadem; Shalamar Georgia; Rasana W Sermswan; Paul Keim
Journal:  Appl Environ Microbiol       Date:  2007-08-24       Impact factor: 4.792

Review 4.  Laboratory diagnosis of melioidosis: past, present and future.

Authors:  Susanna K P Lau; Siddharth Sridhar; Chi-Chun Ho; Wang-Ngai Chow; Kim-Chung Lee; Ching-Wan Lam; Kwok-Yung Yuen; Patrick C Y Woo
Journal:  Exp Biol Med (Maywood)       Date:  2015-04-22

Review 5.  Human Melioidosis.

Authors:  I Gassiep; M Armstrong; R Norton
Journal:  Clin Microbiol Rev       Date:  2020-03-11       Impact factor: 26.132

6.  Novel pan-genomic analysis approach in target selection for multiplex PCR identification and detection of Burkholderia pseudomallei, Burkholderia thailandensis, and Burkholderia cepacia complex species: a proof-of-concept study.

Authors:  Chi-Chun Ho; Candy C Y Lau; Paolo Martelli; San-Yuen Chan; Cindy W S Tse; Alan K L Wu; Kwok-Yung Yuen; Susanna K P Lau; Patrick C Y Woo
Journal:  J Clin Microbiol       Date:  2010-12-22       Impact factor: 5.948

7.  First record of Burkholderia mallei Turkey 10 strain originating from glanderous horses from Brazil.

Authors:  Marcus Vinícius D Falcão; Pedro P M Silveira; Vania L A Santana; Larissa O da Rocha; Karla P Chaves; Rinaldo A Mota
Journal:  Braz J Microbiol       Date:  2019-07-18       Impact factor: 2.476

8.  Multiplex assay based on single-nucleotide polymorphisms for rapid identification of Brucella isolates at the species level.

Authors:  Julie C Scott; Mark S Koylass; Michael R Stubberfield; Adrian M Whatmore
Journal:  Appl Environ Microbiol       Date:  2007-09-21       Impact factor: 4.792

9.  Development of real-time PCR assays and evaluation of their potential use for rapid detection of Burkholderia pseudomallei in clinical blood specimens.

Authors:  Chonthida Supaprom; Dongling Wang; Chanvit Leelayuwat; Wisansanee Thaewpia; Wattanachai Susaengrat; Victor Koh; Eng Eong Ooi; Ganjana Lertmemongkolchai; Yichun Liu
Journal:  J Clin Microbiol       Date:  2007-07-18       Impact factor: 5.948

10.  A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions.

Authors:  Apichai Tuanyok; Raymond K Auerbach; Thomas S Brettin; David C Bruce; A Christine Munk; J Chris Detter; Talima Pearson; Heidie Hornstra; Rasana W Sermswan; Vanaporn Wuthiekanun; Sharon J Peacock; Bart J Currie; Paul Keim; David M Wagner
Journal:  J Bacteriol       Date:  2007-10-12       Impact factor: 3.490
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