Literature DB >> 17720819

Fine-scale genetic diversity among Burkholderia pseudomallei soil isolates in northeast Thailand.

Jana M U'ren1, Heidie Hornstra, Talima Pearson, James M Schupp, Benjamin Leadem, Shalamar Georgia, Rasana W Sermswan, Paul Keim.   

Abstract

Burkholderia pseudomallei soil isolates from northeast Thailand were genotyped using multiple-locus variable-number tandem repeat (VNTR) analysis (MLVA) and multilocus sequence typing (MLST). MLVA identified 19 genotypes within three clades, while MLST revealed two genotypes. These close genetic relationships imply a recent colonization followed by localized expansion, similar to what occurs in an outbreak situation.

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Year:  2007        PMID： 17720819      PMCID： PMC2075045          DOI： 10.1128/AEM.00986-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  19 in total

1.  Pseudomonas (Burkholderia) pseudomallei in Thailand, 1964-1967: geographic distribution of the organism, attempts to identify cases of active infection, and presence of antibody in representative sera.

Authors:  R A Finkelstein; P Atthasampunna; M Chulasamaya
Journal:  Am J Trop Med Hyg       Date:  2000-02       Impact factor: 2.345

2.  Ribotyping of Burkholderia pseudomallei from clinical and soil isolates in Thailand.

Authors:  R W Sermswan; S Wongratanacheewin; S Trakulsomboon; V Thamlikitkul
Journal:  Acta Trop       Date:  2001-12-21       Impact factor: 3.112

3.  Isolates of Burkholderia pseudomallei from Northern Australia are distinct by multilocus sequence typing, but strain types do not correlate with clinical presentation.

Authors:  Allen C Cheng; Daniel Godoy; Mark Mayo; Daniel Gal; Brian G Spratt; Bart J Currie
Journal:  J Clin Microbiol       Date:  2004-12       Impact factor: 5.948

4.  Evaluation of Culture Techniques for Isolation of Pseudomonas pseudomallei from Soil.

Authors:  L R Ashdown; S G Clarke
Journal:  Appl Environ Microbiol       Date:  1992-12       Impact factor: 4.792

Review 5.  Melioidosis: epidemiology, pathophysiology, and management.

Authors:  Allen C Cheng; Bart J Currie
Journal:  Clin Microbiol Rev       Date:  2005-04       Impact factor: 26.132

6.  Nonrandom distribution of Burkholderia pseudomallei clones in relation to geographical location and virulence.

Authors:  Mongkol Vesaratchavest; Sarinna Tumapa; Nicholas P J Day; Vanaporn Wuthiekanun; Wirongrong Chierakul; Matthew T G Holden; Nicholas J White; Bart J Currie; Brian G Spratt; Edward J Feil; Sharon J Peacock
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

7.  Epidemiology of Burkholderia pseudomallei in Thailand.

Authors:  V Vuddhakul; P Tharavichitkul; N Na-Ngam; S Jitsurong; B Kunthawa; P Noimay; P Noimay; A Binla; V Thamlikitkul
Journal:  Am J Trop Med Hyg       Date:  1999-03       Impact factor: 2.345

8.  Melioidosis: a major cause of community-acquired septicemia in northeastern Thailand.

Authors:  W Chaowagul; N J White; D A Dance; Y Wattanagoon; P Naigowit; T M Davis; S Looareesuwan; N Pitakwatchara
Journal:  J Infect Dis       Date:  1989-05       Impact factor: 5.226

9.  Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei.

Authors:  Daniel Godoy; Gaynor Randle; Andrew J Simpson; David M Aanensen; Tyrone L Pitt; Reimi Kinoshita; Brian G Spratt
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

10.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937
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  15 in total

1.  Development of a multiple-locus variable-number tandem-repeat typing scheme for genetic fingerprinting of Burkholderia cenocepacia and application to nationwide epidemiological analysis.

Authors:  Christine Segonds; Michelle Thouverez; Antoine Barthe; Nadège Bossuet-Greif; Lenka Tisseyre; Patrick Plésiat; Gilles Vergnaud; Gérard Chabanon; Christine Pourcel
Journal:  J Clin Microbiol       Date:  2014-11-19       Impact factor: 5.948

2.  A genomic survey of positive selection in Burkholderia pseudomallei provides insights into the evolution of accidental virulence.

Authors:  Tannistha Nandi; Catherine Ong; Arvind Pratap Singh; Justin Boddey; Timothy Atkins; Mitali Sarkar-Tyson; Angela E Essex-Lopresti; Hui Hoon Chua; Talima Pearson; Jason F Kreisberg; Christina Nilsson; Pramila Ariyaratne; Catherine Ronning; Liliana Losada; Yijun Ruan; Wing-Kin Sung; Donald Woods; Richard W Titball; Ifor Beacham; Ian Peak; Paul Keim; William C Nierman; Patrick Tan
Journal:  PLoS Pathog       Date:  2010-04-01       Impact factor: 6.823

3.  The Type VI secretion system spike protein VgrG5 mediates membrane fusion during intercellular spread by pseudomallei group Burkholderia species.

Authors:  Isabelle J Toesca; Christopher T French; Jeff F Miller
Journal:  Infect Immun       Date:  2014-01-13       Impact factor: 3.441

4.  Biogeography of Burkholderia pseudomallei in the Torres Strait Islands of Northern Australia.

Authors:  Anthony Baker; Mark Mayo; Leigh Owens; Graham Burgess; Robert Norton; William John Hannan McBride; Bart J Currie; Jeffrey Warner
Journal:  J Clin Microbiol       Date:  2013-05-22       Impact factor: 5.948

5.  Molecular phylogeny of Burkholderia pseudomallei from a remote region of Papua New Guinea.

Authors:  Anthony Baker; Talima Pearson; Erin P Price; Julia Dale; Paul Keim; Heidie Hornstra; Andrew Greenhill; Gabriel Padilla; Jeffrey Warner
Journal:  PLoS One       Date:  2011-03-31       Impact factor: 3.240

6.  Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis.

Authors:  Erin P Price; Heidie M Hornstra; Direk Limmathurotsakul; Tamara L Max; Derek S Sarovich; Amy J Vogler; Julia L Dale; Jennifer L Ginther; Benjamin Leadem; Rebecca E Colman; Jeffrey T Foster; Apichai Tuanyok; David M Wagner; Sharon J Peacock; Talima Pearson; Paul Keim
Journal:  PLoS Pathog       Date:  2010-01-15       Impact factor: 6.823

7.  Burkholderia Pseudomallei is genetically diverse in agricultural land in Northeast Thailand.

Authors:  Vanaporn Wuthiekanun; Direk Limmathurotsakul; Narisara Chantratita; Edward J Feil; Nicholas P J Day; Sharon J Peacock
Journal:  PLoS Negl Trop Dis       Date:  2009-08-04

Review 8.  Systematic review and consensus guidelines for environmental sampling of Burkholderia pseudomallei.

Authors:  Direk Limmathurotsakul; David A B Dance; Vanaporn Wuthiekanun; Mirjam Kaestli; Mark Mayo; Jeffrey Warner; David M Wagner; Apichai Tuanyok; Heiman Wertheim; Tan Yoke Cheng; Chiranjay Mukhopadhyay; Savithiri Puthucheary; Nicholas P J Day; Ivo Steinmetz; Bart J Currie; Sharon J Peacock
Journal:  PLoS Negl Trop Dis       Date:  2013-03-21

9.  Identification of melioidosis outbreak by multilocus variable number tandem repeat analysis.

Authors:  Bart J Currie; Asha Haslem; Talima Pearson; Heidie Hornstra; Benjamin Leadem; Mark Mayo; Daniel Gal; Linda Ward; Daniel Godoy; Brian G Spratt; Paul Keim
Journal:  Emerg Infect Dis       Date:  2009-02       Impact factor: 6.883

10.  Multiple Locus Variable number of tandem repeat Analysis: A molecular genotyping tool for Paenibacillus larvae.

Authors:  Tine Descamps; Lina De Smet; Pieter Stragier; Paul De Vos; Dirk C de Graaf
Journal:  Microb Biotechnol       Date:  2016-07-01       Impact factor: 5.813
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