| Literature DB >> 16271138 |
Markus Pfenninger1, Magda Hrabáková, Dirk Steinke, Aline Dèpraz.
Abstract
BACKGROUND: Costly structures need to represent an adaptive advantage in order to be maintained over evolutionary times. Contrary to many other conspicuous shell ornamentations of gastropods, the haired shells of several Stylommatophoran land snails still lack a convincing adaptive explanation. In the present study, we analysed the correlation between the presence/absence of hairs and habitat conditions in the genus Trochulus in a Bayesian framework of character evolution.Entities:
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Year: 2005 PMID: 16271138 PMCID: PMC1310604 DOI: 10.1186/1471-2148-5-59
Source DB: PubMed Journal: BMC Evol Biol ISSN: 1471-2148 Impact factor: 3.260
Figure 1Unrooted consensus tree of 90,000 trees sampled by the Markov-chain in Bayesian analysis for the COI-fragment. Numbers on nodes indicate the Bayesian posterior probability.
Pairwise uncorrected COI sequence divergence among lineages and species (mean ± s.d.).
| clade | ||||||||||||||||
| 0.143 ± 0.017 | 0.144 ± 0.017 | 0.138 ± | 0.117 ± 0.016 | |||||||||||||
| 0.135 ± 0.017 | 0.129 ± 0.016 | 0.140 ± | 0.125 ± 0.016 | Jura clade | ||||||||||||
| 0.144 ± 0.016 | 0.152 ± 0.018 | 0.141 ± | 0.130 ± 0.016 | |||||||||||||
| 0.146 ± 0.017 | 0.105 ± 0.016 | 0.125 ± | 0.127 ± 0.017 | 0.142 ± 0.017 | 0.126 ± 0.016 | 0.138 ± 0.017 | ||||||||||
| 0.148 ± 0.017 | 0.109 ± 0.016 | 0.135 ± | 0.117 ± 0.016 | 0.134 ± 0.016 | 0.104 ± 0.014 | 0.107 ± 0.015 | ||||||||||
| 0.152 ± 0.017 | 0.112 ± 0.015 | 0.126 ± | 0.119 ± 0.016 | 0.146 ± 0.016 | 0.113 ± 0.015 | 0.114 ± 0.015 | clade | |||||||||
| 0.142 ± 0.017 | 0.139 ± 0.017 | 0.136 ± | 0.109 ± 0.016 | 0.132 ± 0.017 | 0.117 ± 0.016 | 0.147 ± 0.016 | ||||||||||
| 0.164 ± 0.017 | 0.153 ± 0.018 | 0.170 ± | 0.169 ± 0.018 | 0.162 ± 0.017 | 0.126 ± 0.015 | 0.147 ± 0.017 | ||||||||||
| 0.150 ± 0.017 | 0.151 ± 0.017 | 0.155 ± | 0.144 ± 0.017 | 0.148 ± 0.016 | 0.124 ± 0.015 | 0.133 ± 0.016 | ||||||||||
| 0.158 ± 0.018 | 0.136 ± 0.017 | 0.141 ± | 0.128 ± 0.018 | 0.164 ± 0.020 | 0.154 ± 0.018 | 0.167 ± 0.019 | ||||||||||
| 0.153 ± 0.017 | 0.137 ± 0.017 | 0.151 ± | 0.142 ± 0.017 | 0.151 ± 0.016 | 0.128 ± 0.015 | 0.137 ± 0.016 | ||||||||||
| 0.144 ± 0.018 | 0.139 ± 0.018 | 0.154 ± | 0.152 ± 0.018 | 0.160 ± 0.018 | 0.153 ± 0.018 | 0.160 ± 0.018 | 0.168 ± 0.019 | 0.149 ± 0.018 | 0.151 ± 0.018 | 0.173 ± 0.019 | 0.171 ± 0.019 | 0.165 ± 0.018 | 0.163 ± | 0.168 ± 0.019 | ||
| 0.142 ± 0.016 | 0.141 ± 0.015 | 0.151 ± | 0.153 ± 0.017 | 0.159 ± 0.014 | 0.151 ± 0.019 | 0.162 ± 0.019 | 0.167 ± 0.018 | 0.147 ± 0.016 | 0.150 ± 0.019 | 0.173 ± 0.019 | 0.173 ± 0.020 | 0.162 ± 0.016 | 0.161 ± | 0.170 ± 0.020 |
Figure 2Consensus tree of 90,000 trees sampled by the Markov-chain in Bayesian analysis for the total data set (1383 bp of COI, 16S and ITS1). Numbers on nodes indicate the Bayesian posterior probabilities.
Figure 3Two first components of the PCA of the sampled localities over 9 environmental variables. Black dots: populations with haired individuals. Open squares: populations with hair-less individuals. Sampling sites above the dotted line are considered moist whereas those under it are dry.
Table of sampling sites, presumed taxon, habitat characterisation and presence or absence of hairs.
| Sampling site | Abbreviation | Geographical position | Presumed taxon | Habitat | Humidity | Hairs |
| Burgsinn, Bayern, Germany | D3 | 50°09' 31"N 09°40'34"E | wood | moist | yes | |
| Habichtstal, Bayern, Germany | D4 | 50°02'54"N 09°25'41"E | wood | moist | yes | |
| Dommershausen, Rheinland-Pfalz, Germany | D5 | 50°07'45"N 07°23'47"E | wood | moist | yes | |
| Bingen, Rheinland-Pfalz, Germany | D6 | 49°55'56"N 07°58'57"E | wood | moist | yes | |
| Eltville, Hessen, Germany | D7 | 50°0059"N 08°04'28"E | wood | moist | yes | |
| Büchsenberg, Baden-Württemberg, Germany | D8 | 48°04'55"N 07°37'23"E | wood | moist | yes | |
| St. Seine l'Abbaye, Côte d'Or, France | MdO | 47°26'04"N 04°46'55"E | wood | - | yes | |
| La Neirigue, Fribourg, Switzerland | CH3 | 46°42'16"N 06°55'12"E | riverbank vegetation | moist | no | |
| Barrage des Rossens, Fribourg, Switzerland | CH6 | 46°43'33"N 07°06'55"E | wood | moist | yes | |
| Gorges de la Jogne, Fribourg, Switzerland | CH8 | 46°36'45"N 07°07'10"E | gorge | moist | yes | |
| Ste Croix, Vaud, Switzerland | CH10 | 46°50'44"N 06°32'02"E | open wood | dry | no | |
| La Côte aux Fées, Neuchâtel, Switzerland | CH11+12 | 46°50'74"N 06°32'42"E | grassland | dry | no | |
| Col des Mosses, Vaud, Switzerland | CH13 | 46°25'49"N 07°08'22"E | wood | moist | yes | |
| Vallée du Rhône, Vaud, Switzerland | CH15 | 46°19'43"N 06°13'39"E | wood | moist | yes | |
| Sensetal, Bern, Switzerland | CH18 | 46°49'46"N 07°19'19"E | riverbank vegetation | dry | no | |
| Birseschlucht, Bern, Switzerland | CH21 | 47°17'54"N 07°23'00"E | cliff | dry | no | |
| Birseschlucht, Bern, Switzerland | CH24 | 47°16'56"N 07°23'13"E | wood | moist | yes | |
| Château d'Oex, Vaud, Switzerland | CHAT | 46°16'23"N 07°21'42"E | alpine meadow | dry | no | |
| Bannalppass, Nidwalden, Switzerland | TA | 46°53'40"N 08°27'15"E | alpine meadow | moist | yes | |
| Bannalppass, Nidwalden, Switzerland | TB | 46°53'43"N 08°27'21"E | alpine meadow | dry | no | |
| Velká Javořina, Velká nad Veličkou, Czech Republic | TVJ | 48°51'26"N 17°39'11"E | wood | moist | yes | |
| Bohuslavice u Zlína, Czech Republic | PLB | 49°09'19"N 17°37'29"E | meadow | - | yes |
Figure 4Bayesian reconstruction of ancestral states (hairs/no hairs, moist/dry habitat, respectively) on the topology of the Bayesian consensus tree (restricted to the Trochulus-clade).
Figure 5Mean (+/- s.d.) minimum necessary force to move haired and smooth shells on wet and dry leaf surfaces.
Figure 6Active . Note that the water-film on the leaf is adhering to the shell.
Primers used for specific PCR and direct sequencing, amplification conditions and temperature profiles.
| Primer | Sequence | amplification conditions | temperature profile |
| COI universal [43] | 5'-GGTCAACAATCATAAAGATATTGG-3' 5'-TAAACTTCAGGGTGACCAAAAAATCA-3' | total volume 25 μl with: 0.17 mM dNTPs 3 mM MgCl2 in 1 × PCR buffer 0.13 μM of each primer 1 unit Taq polymerase (Invitrogen) | 1 cycle of 2.5 min at 94°C |
| 16S universal [44] | 5'-CGGCCGCCTGTTT ATCAAAAACAT-3' 5'-GGAGCTCCGGTTTGAACTCAGATC-3' | total volume 15 μl with: 0.1 mM dNTPs 2.5 mM MgCl2 in 1 × PCR buffer 0.2 μM of each primer 0.5 unit Taq polymerase (Invitrogen) | 1 cycle of 2.5 min at 90°C |
| ITS-1 mollusc specific [45] | 5'-TAACAAGGTTTCCGTAGGTGAA-3' 5'GCTGCGTTCTTCATCGATGC-3' | total volume 15 μl with: 0.3 mM dNTPs 2.5 mM MgCl2 in 1 × PCR buffer 0.18 μM of each primer 0.5 unit Taq polymerase (Invitrogen) | 1 cycle of 3 min at 94°C |