Literature DB >> 16264193

The PAS/LOV protein VIVID supports a rapidly dampened daytime oscillator that facilitates entrainment of the Neurospora circadian clock.

Mark Elvin1, Jennifer J Loros, Jay C Dunlap, Christian Heintzen.   

Abstract

A light-entrainable circadian clock controls development and physiology in Neurospora crassa. Existing simple models for resetting based on light pulses (so-called nonparametric entrainment) predict that constant light should quickly send the clock to an arrhythmic state; however, such a clock would be of little use to an organism in changing photoperiods in the wild, and we confirm that true, albeit dampened, rhythmicity can be observed in extended light. This rhythmicity requires the PAS/LOV protein VIVID (VVD) that acts, in the light, to facilitate expression of an oscillator that is related to, but distinguishable from, the classic FREQUENCY/WHITE-COLLAR complex (FRQ/WCC)-based oscillator that runs in darkness. VVD prevents light resetting of the clock at dawn but, by influencing frq RNA turnover, promotes resetting at dusk, thereby allowing the clock to run through the dawn transition and take its phase cues from dusk. Consistent with this, loss of VVD yields a clock whose performance follows the simple predictions of earlier models, and overexpression of VVD restores rhythmicity in the light and sensitivity of phase to the duration of the photoperiod.

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Year:  2005        PMID: 16264193      PMCID: PMC1276733          DOI: 10.1101/gad.349305

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  42 in total

Review 1.  Time zones: a comparative genetics of circadian clocks.

Authors:  M W Young; S A Kay
Journal:  Nat Rev Genet       Date:  2001-09       Impact factor: 53.242

Review 2.  Multilevel regulation of the circadian clock.

Authors:  N Cermakian; P Sassone-Corsi
Journal:  Nat Rev Mol Cell Biol       Date:  2000-10       Impact factor: 94.444

Review 3.  Living by the calendar: how plants know when to flower.

Authors:  Marcelo J Yanovsky; Steve A Kay
Journal:  Nat Rev Mol Cell Biol       Date:  2003-04       Impact factor: 94.444

4.  Functional conservation of light, oxygen, or voltage domains in light sensing.

Authors:  Ping Cheng; Qiyang He; Yuhong Yang; Lixin Wang; Yi Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-28       Impact factor: 11.205

Review 5.  The art of entrainment.

Authors:  Till Roenneberg; Serge Daan; Martha Merrow
Journal:  J Biol Rhythms       Date:  2003-06       Impact factor: 3.182

6.  Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY.

Authors:  N Y Garceau; Y Liu; J J Loros; J C Dunlap
Journal:  Cell       Date:  1997-05-02       Impact factor: 41.582

7.  Phototropin LOV domains exhibit distinct roles in regulating photoreceptor function.

Authors:  John M Christie; Trevor E Swartz; Roberto A Bogomolni; Winslow R Briggs
Journal:  Plant J       Date:  2002-10       Impact factor: 6.417

8.  VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation.

Authors:  Carsten Schwerdtfeger; Hartmut Linden
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

9.  Circadian rhythms in Neurospora crassa: farnesol or geraniol allow expression of rhythmicity in the otherwise arrhythmic strains frq10, wc-1, and wc-2.

Authors:  Tabitha Granshaw; Michelle Tsukamoto; Stuart Brody
Journal:  J Biol Rhythms       Date:  2003-08       Impact factor: 3.182

Review 10.  A fly's eye view of circadian entrainment.

Authors:  Lesley J Ashmore; Amita Sehgal
Journal:  J Biol Rhythms       Date:  2003-06       Impact factor: 3.182

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  45 in total

1.  A Light-Inducible Strain for Genome-Wide Histone Turnover Profiling in Neurospora crassa.

Authors:  William K Storck; Sabrina Z Abdulla; Michael R Rountree; Vincent T Bicocca; Eric U Selker
Journal:  Genetics       Date:  2020-05-01       Impact factor: 4.562

Review 2.  Circadian rhythms in Neurospora crassa and other filamentous fungi.

Authors:  Yi Liu; Deborah Bell-Pedersen
Journal:  Eukaryot Cell       Date:  2006-08

Review 3.  Dissecting the mechanisms of the clock in Neurospora.

Authors:  Jennifer Hurley; Jennifer J Loros; Jay C Dunlap
Journal:  Methods Enzymol       Date:  2014-12-26       Impact factor: 1.600

4.  Quantitative trait loci for the circadian clock in Neurospora crassa.

Authors:  Tae-Sung Kim; Benjamin A Logsdon; Sohyun Park; Jason G Mezey; Kwangwon Lee
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

Review 5.  A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day.

Authors:  J C Dunlap; J J Loros; H V Colot; A Mehra; W J Belden; M Shi; C I Hong; L F Larrondo; C L Baker; C-H Chen; C Schwerdtfeger; P D Collopy; J J Gamsby; R Lambreghts
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2007

6.  Rhythmic conidiation in constant light in vivid mutants of Neurospora crassa.

Authors:  Kevin Schneider; Sabrina Perrino; Kim Oelhafen; Sanshu Li; Artiom Zatsepin; Patricia Lakin-Thomas; Stuart Brody
Journal:  Genetics       Date:  2009-01-12       Impact factor: 4.562

7.  A novel cryptochrome-dependent oscillator in Neurospora crassa.

Authors:  Imade Y Nsa; Nirmala Karunarathna; Xiaoguang Liu; Howard Huang; Brittni Boetteger; Deborah Bell-Pedersen
Journal:  Genetics       Date:  2014-10-30       Impact factor: 4.562

8.  Neurospora sees the light: light signaling components in a model system.

Authors:  Chen-Hui Chen; Jennifer J Loros
Journal:  Commun Integr Biol       Date:  2009-09

9.  Robustness from flexibility in the fungal circadian clock.

Authors:  Ozgur E Akman; David A Rand; Paul E Brown; Andrew J Millar
Journal:  BMC Syst Biol       Date:  2010-06-24

Review 10.  Light regulation of metabolic pathways in fungi.

Authors:  Doris Tisch; Monika Schmoll
Journal:  Appl Microbiol Biotechnol       Date:  2009-11-14       Impact factor: 4.813

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