Literature DB >> 18522516

A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day.

J C Dunlap1, J J Loros, H V Colot, A Mehra, W J Belden, M Shi, C I Hong, L F Larrondo, C L Baker, C-H Chen, C Schwerdtfeger, P D Collopy, J J Gamsby, R Lambreghts.   

Abstract

Neurospora has proven to be a tractable model system for understanding the molecular bases of circadian rhythms in eukaryotes. At the core of the circadian oscillatory system is a negative feedback loop in which two transcription factors, WC-1 and WC-2, act together to drive expression of the frq gene. WC-2 enters the promoter region of frq coincident with increases in frq expression and then exits when the cycle of transcription is over, whereas WC-1 can always be found there. FRQ promotes the phosphorylation of the WCs, thereby decreasing their activity, and phosphorylation of FRQ then leads to its turnover, allowing the cycle to reinitiate. By understanding the action of light and temperature on frq and FRQ expression, the molecular basis of circadian entrainment to environmental light and temperature cues can be understood, and recently a specific role for casein kinase 2 has been found in the mechanism underlying circadian temperature-compensation. These data promise molecular explanations for all of the canonical circadian properties of this model system, providing biochemical answers and regulatory logic that may be extended to more complex eukaryotes including humans.

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Year:  2007        PMID: 18522516      PMCID: PMC3683860          DOI: 10.1101/sqb.2007.72.072

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  70 in total

1.  Molecular evidence for the early colonization of land by fungi and plants.

Authors:  D S Heckman; D M Geiser; B R Eidell; R L Stauffer; N L Kardos; S B Hedges
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

Review 2.  Proteins in the Neurospora circadian clockworks.

Authors:  Jay C Dunlap
Journal:  J Biol Chem       Date:  2006-08-11       Impact factor: 5.157

Review 3.  White collar proteins: PASsing the light signal in Neurospora crassa.

Authors:  P Ballario; G Macino
Journal:  Trends Microbiol       Date:  1997-11       Impact factor: 17.079

4.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

5.  The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock.

Authors:  Peter Ruoff; Jennifer J Loros; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-28       Impact factor: 11.205

6.  VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation.

Authors:  Carsten Schwerdtfeger; Hartmut Linden
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

7.  Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

Authors:  S Sugano; C Andronis; R M Green; Z Y Wang; E M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

Review 8.  The Neurospora crassa circadian clock.

Authors:  Christian Heintzen; Yi Liu
Journal:  Adv Genet       Date:  2007       Impact factor: 1.944

9.  Conformational switching in the fungal light sensor Vivid.

Authors:  Brian D Zoltowski; Carsten Schwerdtfeger; Joanne Widom; Jennifer J Loros; Alexandrine M Bilwes; Jay C Dunlap; Brian R Crane
Journal:  Science       Date:  2007-05-18       Impact factor: 47.728

10.  CYCLE is a second bHLH-PAS clock protein essential for circadian rhythmicity and transcription of Drosophila period and timeless.

Authors:  J E Rutila; V Suri; M Le; W V So; M Rosbash; J C Hall
Journal:  Cell       Date:  1998-05-29       Impact factor: 41.582

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  36 in total

1.  Fungal functional genomics: tunable knockout-knock-in expression and tagging strategies.

Authors:  Luis F Larrondo; Hildur V Colot; Christopher L Baker; Jennifer J Loros; Jay C Dunlap
Journal:  Eukaryot Cell       Date:  2009-03-13

2.  A large-scale functional RNAi screen reveals a role for CK2 in the mammalian circadian clock.

Authors:  Bert Maier; Sabrina Wendt; Jens T Vanselow; Thomas Wallach; Silke Reischl; Stefanie Oehmke; Andreas Schlosser; Achim Kramer
Journal:  Genes Dev       Date:  2009-03-15       Impact factor: 11.361

3.  Phosphorylation modulates rapid nucleocytoplasmic shuttling and cytoplasmic accumulation of Neurospora clock protein FRQ on a circadian time scale.

Authors:  Axel C R Diernfellner; Christina Querfurth; Carlos Salazar; Thomas Höfer; Michael Brunner
Journal:  Genes Dev       Date:  2009-09-15       Impact factor: 11.361

Review 4.  Understanding systems-level properties: timely stories from the study of clocks.

Authors:  John B Hogenesch; Hiroki R Ueda
Journal:  Nat Rev Genet       Date:  2011-05-10       Impact factor: 53.242

5.  Multiple roles and interaction factors of an E-box element in Chlamydomonas reinhardtii.

Authors:  Stefanie B Seitz; Wolfram Weisheit; Maria Mittag
Journal:  Plant Physiol       Date:  2010-02-12       Impact factor: 8.340

Review 6.  The social network: deciphering fungal language.

Authors:  Abigail C Leeder; Javier Palma-Guerrero; N Louise Glass
Journal:  Nat Rev Microbiol       Date:  2011-06       Impact factor: 60.633

7.  Transcription factors in light and circadian clock signaling networks revealed by genomewide mapping of direct targets for neurospora white collar complex.

Authors:  Kristina M Smith; Gencer Sancar; Rigzin Dekhang; Christopher M Sullivan; Shaojie Li; Andrew G Tag; Cigdem Sancar; Erin L Bredeweg; Henry D Priest; Ryan F McCormick; Terry L Thomas; James C Carrington; Jason E Stajich; Deborah Bell-Pedersen; Michael Brunner; Michael Freitag
Journal:  Eukaryot Cell       Date:  2010-07-30

Review 8.  Molecular mechanism of the Neurospora circadian oscillator.

Authors:  Jinhu Guo; Yi Liu
Journal:  Protein Cell       Date:  2010-05-08       Impact factor: 14.870

9.  Minimum criteria for DNA damage-induced phase advances in circadian rhythms.

Authors:  Christian I Hong; Judit Zámborszky; Attila Csikász-Nagy
Journal:  PLoS Comput Biol       Date:  2009-05-08       Impact factor: 4.475

Review 10.  Light regulation of metabolic pathways in fungi.

Authors:  Doris Tisch; Monika Schmoll
Journal:  Appl Microbiol Biotechnol       Date:  2009-11-14       Impact factor: 4.813

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