Literature DB >> 16264183

A putative exonic splicing polymorphism in the BCL6 gene and the risk of non-Hodgkin lymphoma.

Yawei Zhang1, Qing Lan, Nathaniel Rothman, Yong Zhu, Shelia Hoar Zahm, Sophia S Wang, Theodore R Holford, Brian Leaderer, Peter Boyle, Bing Zhang, Kaiyong Zou, Stephen Chanock, Tongzhang Zheng.   

Abstract

Recent studies have shown that the B-cell lymphoma 6 gene (BCL6) is an oncogene that contributes to lymphomagenesis. Exon 6 of BCL6 contains a common single nucleotide polymorphism (SNP) (-195 C>T; dbSNP ID: rs1056932) that alters a potential binding site for an exonic splicing enhancer. We used unconditional logistic regression models to examine the association between this SNP and the risk of non-Hodgkin lymphoma (NHL) in a population-based case-control study of women residing in Connecticut (461 case patients and 535 control subjects). The risk of NHL among women with the CC genotype was more than double that of women with the TT genotype (odds ratio [OR] = 2.2, 95% confidence interval [CI] = 1.5 to 3.3). Higher risks were observed for two NHL subtypes, namely B-cell chronic lymphatic leukemia/prolymphocytic leukemia/small lymphocytic lymphoma (OR = 3.5, 95% CI = 1.6 to 7.8) and T-cell lymphoma (OR = 5.2, 95% CI = 2.0 to 13.3). Our results support the hypothesis that a genetic variant that could alter mRNA transcripts of BCL6 may contribute to the etiology of NHL and suggest that this variant warrants further investigation.

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Year:  2005        PMID: 16264183     DOI: 10.1093/jnci/dji344

Source DB:  PubMed          Journal:  J Natl Cancer Inst        ISSN: 0027-8874            Impact factor:   13.506


  20 in total

1.  Birth order and risk of non-hodgkin lymphoma--true association or bias?

Authors:  Andrew E Grulich; Claire M Vajdic; Michael O Falster; Eleanor Kane; Karin Ekstrom Smedby; Paige M Bracci; Silvia de Sanjose; Nikolaus Becker; Jenny Turner; Otoniel Martinez-Maza; Mads Melbye; Eric A Engels; Paolo Vineis; Adele Seniori Costantini; Elizabeth A Holly; John J Spinelli; Carlo La Vecchia; Tongzhang Zheng; Brian C H Chiu; Silvia Franceschi; Pierluigi Cocco; Marc Maynadié; Lenka Foretova; Anthony Staines; Paul Brennan; Scott Davis; Richard K Severson; James R Cerhan; Elizabeth C Breen; Brenda Birmann; Wendy Cozen
Journal:  Am J Epidemiol       Date:  2010-08-18       Impact factor: 4.897

2.  Identification of gene-environment interactions in cancer studies using penalization.

Authors:  Jin Liu; Jian Huang; Yawei Zhang; Qing Lan; Nathaniel Rothman; Tongzhang Zheng; Shuangge Ma
Journal:  Genomics       Date:  2013-08-29       Impact factor: 5.736

3.  Genetic variations in xenobiotic metabolic pathway genes, personal hair dye use, and risk of non-Hodgkin lymphoma.

Authors:  Yawei Zhang; Kathryn J Hughes; Shelia Hoar Zahm; Yaqun Zhang; Theodore R Holford; Li Dai; Yana Bai; Xuesong Han; Qin Qin; Qing Lan; Nathaniel Rothman; Yong Zhu; Brian Leaderer; Tongzhang Zheng
Journal:  Am J Epidemiol       Date:  2009-10-12       Impact factor: 4.897

Review 4.  Host genetics in follicular lymphoma.

Authors:  James R Cerhan
Journal:  Best Pract Res Clin Haematol       Date:  2011-05-05       Impact factor: 3.020

Review 5.  Gene-Environment Interaction: A Variable Selection Perspective.

Authors:  Fei Zhou; Jie Ren; Xi Lu; Shuangge Ma; Cen Wu
Journal:  Methods Mol Biol       Date:  2021

6.  PRRC2A and BCL2L11 gene variants influence risk of non-Hodgkin lymphoma: results from the InterLymph consortium.

Authors:  Alexandra Nieters; Lucia Conde; Susan L Slager; Angela Brooks-Wilson; Lindsay Morton; Danica R Skibola; Anne J Novak; Jacques Riby; Stephen M Ansell; Eran Halperin; Tait D Shanafelt; Luz Agana; Alice H Wang; Anneclaire J De Roos; Richard K Severson; Wendy Cozen; John Spinelli; Katja Butterbach; Nikolaus Becker; Silvia de Sanjose; Yolanda Benavente; Pierluigi Cocco; Anthony Staines; Marc Maynadié; Lenka Foretova; Paolo Boffetta; Paul Brennan; Qing Lan; Yawei Zhang; Tongzhang Zheng; Mark Purdue; Bruce Armstrong; Anne Kricker; Claire M Vajdic; Andrew Grulich; Martyn T Smith; Paige M Bracci; Stephen J Chanock; Patricia Hartge; James R Cerhan; Sophia S Wang; Nathaniel Rothman; Christine F Skibola
Journal:  Blood       Date:  2012-10-09       Impact factor: 22.113

7.  Integrative analysis of prognosis data on multiple cancer subtypes.

Authors:  Jin Liu; Jian Huang; Yawei Zhang; Qing Lan; Nathaniel Rothman; Tongzhang Zheng; Shuangge Ma
Journal:  Biometrics       Date:  2014-04-25       Impact factor: 2.571

8.  Risk Factors of Non-Hodgkin Lymphoma.

Authors:  Yawei Zhang; Ying Dai; Tongzhang Zheng; Shuangge Ma
Journal:  Expert Opin Med Diagn       Date:  2011-11-01

9.  Cyclin D1 splice variant and risk for non-Hodgkin lymphoma.

Authors:  Sophia S Wang; Wendy Cozen; Richard K Severson; Patricia Hartge; James R Cerhan; Scott Davis; Robert Welch; Nathaniel Rothman; Stephen J Chanock
Journal:  Hum Genet       Date:  2006-06-17       Impact factor: 4.132

10.  Identification of non-Hodgkin's lymphoma prognosis signatures using the CTGDR method.

Authors:  Shuangge Ma; Yawei Zhang; Jian Huang; Xuesong Han; Theodore Holford; Qing Lan; Nathaniel Rothman; Peter Boyle; Tongzhang Zheng
Journal:  Bioinformatics       Date:  2009-10-22       Impact factor: 6.937

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