Literature DB >> 16263727

Creation of GPCR-based chemical sensors by directed evolution in yeast.

Addison D Ault1, James R Broach.   

Abstract

G protein-coupled receptors (GPCRs) form a class of biological chemical sensors with an enormous diversity in ligand binding and sensitivity. To explore structural aspects of ligand recognition, we subjected the human UDP-glucose receptor (P2Y14) functionally expressed in the yeast Saccharomyces to directed evolution. We sought to generate new receptor subtypes with ligand-binding properties that would be useful in the development of practical biosensors. Mutagenesis of the entire UDP-glucose receptor gene yielded receptors with increased activity but similar ligand specificities, while random mutagenesis of residues in the immediate vicinity of the ligand-binding pocket yielded mutants with altered ligand specificity. By first sensitizing the P2Y14 receptor and then redirecting ligand specificity, we were able to create mutant receptors suitable for a simple biosensor. Our results demonstrate the feasibility of altering receptor ligand-binding properties via a directed evolution strategy, using standard yeast genetic techniques. The novel receptor mutants can be used to detect chemical ligands in complex mixtures and to discriminate among chemically or stereochemically related compounds. Specifically, we demonstrate how engineered receptors can be applied in a pairwise manner to differentiate among several chemical analytes that would be indistinguishable with a single receptor. These experiments demonstrate the feasibility of a combinatorial approach to detector design based on the principles of olfaction.

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Year:  2005        PMID: 16263727     DOI: 10.1093/protein/gzi069

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  17 in total

Review 1.  Signalling and pharmacological properties of the P2Y receptor.

Authors:  T K Harden; J I Sesma; I P Fricks; E R Lazarowski
Journal:  Acta Physiol (Oxf)       Date:  2010-03-24       Impact factor: 6.311

2.  Directed evolution of Vibrio fischeri LuxR for improved response to butanoyl-homoserine lactone.

Authors:  Andrew C Hawkins; Frances H Arnold; Rainer Stuermer; Bernhard Hauer; Jared R Leadbetter
Journal:  Appl Environ Microbiol       Date:  2007-08-03       Impact factor: 4.792

3.  Structure-activity relationship of uridine 5'-diphosphoglucose analogues as agonists of the human P2Y14 receptor.

Authors:  Hyojin Ko; Ingrid Fricks; Andrei A Ivanov; T Kendall Harden; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2007-04-04       Impact factor: 7.446

4.  Similarities between UDP-glucose and adenine nucleotide release in yeast: involvement of the secretory pathway.

Authors:  Charles R Esther; Juliana I Sesma; Henrik G Dohlman; Addison D Ault; Marién L Clas; Eduardo R Lazarowski; Richard C Boucher
Journal:  Biochemistry       Date:  2008-08-12       Impact factor: 3.162

5.  Directed evolution of a G protein-coupled receptor for expression, stability, and binding selectivity.

Authors:  Casim A Sarkar; Igor Dodevski; Manca Kenig; Stefan Dudli; Anja Mohr; Emmanuel Hermans; Andreas Plückthun
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-23       Impact factor: 11.205

6.  Principal component analysis of binding energies for single-point mutants of hT2R16 bound to an agonist correlate with experimental mutant cell response.

Authors:  Derek E Chen; Darryl L Willick; Joseph B Ruckel; Wely B Floriano
Journal:  J Comput Biol       Date:  2015-01       Impact factor: 1.479

7.  Molecular dynamics simulation of the P2Y14 receptor. Ligand docking and identification of a putative binding site of the distal hexose moiety.

Authors:  Andrei A Ivanov; Ingrid Fricks; T Kendall Harden; Kenneth A Jacobson
Journal:  Bioorg Med Chem Lett       Date:  2006-10-28       Impact factor: 2.823

8.  Quantification of Gi-mediated inhibition of adenylyl cyclase activity reveals that UDP is a potent agonist of the human P2Y14 receptor.

Authors:  Rhonda L Carter; Ingrid P Fricks; Matthew O Barrett; Lauren E Burianek; Yixing Zhou; Hyojin Ko; Arijit Das; Kenneth A Jacobson; Eduardo R Lazarowski; T Kendall Harden
Journal:  Mol Pharmacol       Date:  2009-09-16       Impact factor: 4.436

Review 9.  A decade of yeast surface display technology: where are we now?

Authors:  Lauren R Pepper; Yong Ku Cho; Eric T Boder; Eric V Shusta
Journal:  Comb Chem High Throughput Screen       Date:  2008-02       Impact factor: 1.339

Review 10.  Tuning microbial hosts for membrane protein production.

Authors:  Maria Freigassner; Harald Pichler; Anton Glieder
Journal:  Microb Cell Fact       Date:  2009-12-29       Impact factor: 5.328

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