Literature DB >> 16262389

E-olefin dipeptide isostere incorporation into a polypeptide backbone enables hydrogen bond perturbation: probing the requirements for Alzheimer's amyloidogenesis.

Yanwen Fu1, Jan Bieschke, Jeffery W Kelly.   

Abstract

Herein, we report a stereospecific E-olefin dipeptide isostere synthesis that can be used to make gram quantities of the Phe-Phe isostere desired for eliminating a specific backbone H-bond donor and acceptor in the Alzheimer's disease related Abeta peptide. The Phe19-Phe20 E-olefin analogue of Abeta(1-40) was prepared by solid-phase peptide synthesis and was subjected to amyloidogenesis conditions. This analogue can aggregate into spherical morphologies but does not progress on to form protofibrils or fibrils as is the case for the all-amide sequence, providing insight into the structural requirements for amyloidogenesis.

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Year:  2005        PMID: 16262389     DOI: 10.1021/ja0551382

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Peptide-Like Molecules (PLMs): A Journey from Peptide Bond Isosteres to Gramicidin S Mimetics and Mitochondrial Targeting Agents.

Authors:  Peter Wipf; Jingbo Xiao; Corey R J Stephenson
Journal:  Chimia (Aarau)       Date:  2009-11       Impact factor: 1.509

2.  Quasiracemic crystallization as a tool to assess the accommodation of noncanonical residues in nativelike protein conformations.

Authors:  David E Mortenson; Kenneth A Satyshur; Ilia A Guzei; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-01-18       Impact factor: 15.419

Review 3.  Amide Bond Bioisosteres: Strategies, Synthesis, and Successes.

Authors:  Shikha Kumari; Angelica V Carmona; Amit K Tiwari; Paul C Trippier
Journal:  J Med Chem       Date:  2020-08-04       Impact factor: 7.446

4.  Computational backbone mutagenesis of Abeta peptides: probing the role of backbone hydrogen bonds in aggregation.

Authors:  Takako Takeda; Dmitri K Klimov
Journal:  J Phys Chem B       Date:  2010-04-15       Impact factor: 2.991

5.  Amide-to-E-olefin versus amide-to-ester backbone H-bond perturbations: Evaluating the O-O repulsion for extracting H-bond energies.

Authors:  Yanwen Fu; Jianmin Gao; Jan Bieschke; Maria A Dendle; Jeffery W Kelly
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

6.  Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles.

Authors:  Joshua L Price; W Seth Horne; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-09-08       Impact factor: 15.419

7.  Labeling proteins with fluorophore/thioamide Förster resonant energy transfer pairs by combining unnatural amino acid mutagenesis and native chemical ligation.

Authors:  Rebecca F Wissner; Solongo Batjargal; Colin M Fadzen; E James Petersson
Journal:  J Am Chem Soc       Date:  2013-04-17       Impact factor: 15.419

8.  Enantiomerically pure alpha-amino aldehydes from silylated alpha-amino acids.

Authors:  Buddy Soto-Cairoli; Jorge Justo de Pomar; John A Soderquist
Journal:  Org Lett       Date:  2007-12-20       Impact factor: 6.005

9.  Toward quantification of protein backbone-backbone hydrogen bonding energies: An energetic analysis of an amide-to-ester mutation in an alpha-helix within a protein.

Authors:  Jianmin Gao; Jeffery W Kelly
Journal:  Protein Sci       Date:  2008-04-23       Impact factor: 6.725

10.  Synthesis of a Chloroalkene Dipeptide Isostere-Containing Peptidomimetic and Its Biological Application.

Authors:  Takuya Kobayakawa; Yudai Matsuzaki; Kentaro Hozumi; Wataru Nomura; Motoyoshi Nomizu; Hirokazu Tamamura
Journal:  ACS Med Chem Lett       Date:  2017-12-27       Impact factor: 4.345

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