Literature DB >> 16260594

Scavenger decapping activity facilitates 5' to 3' mRNA decay.

Hudan Liu1, Megerditch Kiledjian.   

Abstract

mRNA degradation occurs through distinct pathways, one primarily from the 5' end of the mRNA and the second from the 3' end. Decay from the 3' end generates the m7GpppN cap dinucleotide, which is subsequently hydrolyzed to m7Gp and ppN in Saccharomyces cerevisiae by a scavenger decapping activity termed Dcs1p. Although Dcs1p functions in the last step of mRNA turnover, we demonstrate that its activity modulates earlier steps of mRNA decay. Disruption of the DCS1 gene manifests a threefold increase of the TIF51A mRNA half-life. Interestingly, the hydrolytic activity of Dcs1p was essential for the altered mRNA turnover, as Dcs1p, but not a catalytically inactive Dcs1p mutant, complemented the increased mRNA stability. Mechanistic analysis revealed that 5' to 3' exoribonucleolytic activity was impeded in the dcs1Delta strain, resulting in the accumulation of uncapped mRNA. These data define a new role for the Dcs1p scavenger decapping enzyme and demonstrate a novel mechanism whereby the final step in the 3' mRNA decay pathway can influence 5' to 3' exoribonucleolytic activity.

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Year:  2005        PMID: 16260594      PMCID: PMC1280280          DOI: 10.1128/MCB.25.22.9764-9772.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  51 in total

1.  The major mRNA-associated protein YB-1 is a potent 5' cap-dependent mRNA stabilizer.

Authors:  V Evdokimova; P Ruzanov; H Imataka; B Raught; Y Svitkin; L P Ovchinnikov; N Sonenberg
Journal:  EMBO J       Date:  2001-10-01       Impact factor: 11.598

2.  Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Authors:  Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

3.  Regulated ARE-mediated mRNA decay in Saccharomyces cerevisiae.

Authors:  S Vasudevan; S W Peltz
Journal:  Mol Cell       Date:  2001-06       Impact factor: 17.970

4.  Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures.

Authors:  Erwin van Dijk; Nicolas Cougot; Sylke Meyer; Sylvie Babajko; Elmar Wahle; Bertrand Séraphin
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

5.  The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1.

Authors:  Nicole Fischer; Karsten Weis
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

6.  The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes.

Authors:  J M Coller; M Tucker; U Sheth; M A Valencia-Sanchez; R Parker
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

7.  Analysis of recombinant yeast decapping enzyme.

Authors:  Michelle Steiger; Anne Carr-Schmid; David C Schwartz; Megerditch Kiledjian; Roy Parker
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

8.  A nuclear protein in Schizosaccharomyces pombe with homology to the human tumour suppressor Fhit has decapping activity.

Authors:  Zivar Salehi; Lars Geffers; Cristina Vilela; Ralf Birkenhäger; Marina Ptushkina; Karine Berthelot; Myriam Ferro; Simon Gaskell; Iain Hagan; Ben Stapley; John E G McCarthy
Journal:  Mol Microbiol       Date:  2002-10       Impact factor: 3.501

9.  The hDcp2 protein is a mammalian mRNA decapping enzyme.

Authors:  Zuoren Wang; Xinfu Jiao; Anne Carr-Schmid; Megerditch Kiledjian
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-06       Impact factor: 11.205

10.  The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases.

Authors:  Hudan Liu; Nancy D Rodgers; Xinfu Jiao; Megerditch Kiledjian
Journal:  EMBO J       Date:  2002-09-02       Impact factor: 11.598

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  17 in total

1.  Mechanistic and kinetic analysis of the DcpS scavenger decapping enzyme.

Authors:  Shin-Wu Liu; Vaishnavi Rajagopal; Smita S Patel; Megerditch Kiledjian
Journal:  J Biol Chem       Date:  2008-04-25       Impact factor: 5.157

2.  DcpS scavenger decapping enzyme can modulate pre-mRNA splicing.

Authors:  Vincent Shen; Hudan Liu; Shin-Wu Liu; Xinfu Jiao; Megerditch Kiledjian
Journal:  RNA       Date:  2008-04-21       Impact factor: 4.942

3.  Quality control of assembly-defective U1 snRNAs by decapping and 5'-to-3' exonucleolytic digestion.

Authors:  Siddharth Shukla; Roy Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

4.  The decapping scavenger enzyme DCS-1 controls microRNA levels in Caenorhabditis elegans.

Authors:  Gabriel D Bossé; Stefan Rüegger; Maria C Ow; Alejandro Vasquez-Rifo; Evelyne L Rondeau; Victor R Ambros; Helge Grosshans; Martin J Simard
Journal:  Mol Cell       Date:  2013-03-28       Impact factor: 17.970

5.  Mutations in DCPS and EDC3 in autosomal recessive intellectual disability indicate a crucial role for mRNA decapping in neurodevelopment.

Authors:  Iltaf Ahmed; Rebecca Buchert; Mi Zhou; Xinfu Jiao; Kirti Mittal; Taimoor I Sheikh; Ute Scheller; Nasim Vasli; Muhammad Arshad Rafiq; M Qasim Brohi; Anna Mikhailov; Muhammad Ayaz; Attya Bhatti; Heinrich Sticht; Tanveer Nasr; Melissa T Carter; Steffen Uebe; André Reis; Muhammad Ayub; Peter John; Megerditch Kiledjian; John B Vincent; Rami Abou Jamra
Journal:  Hum Mol Genet       Date:  2015-02-20       Impact factor: 6.150

6.  Identification of a quality-control mechanism for mRNA 5'-end capping.

Authors:  Xinfu Jiao; Song Xiang; Chanseok Oh; Charles E Martin; Liang Tong; Megerditch Kiledjian
Journal:  Nature       Date:  2010-08-29       Impact factor: 49.962

7.  7-methylguanosine diphosphate (m(7)GDP) is not hydrolyzed but strongly bound by decapping scavenger (DcpS) enzymes and potently inhibits their activity.

Authors:  Anna Wypijewska; Elzbieta Bojarska; Maciej Lukaszewicz; Janusz Stepinski; Jacek Jemielity; Richard E Davis; Edward Darzynkiewicz
Journal:  Biochemistry       Date:  2012-09-25       Impact factor: 3.162

8.  DcpS as a therapeutic target for spinal muscular atrophy.

Authors:  Jasbir Singh; Michael Salcius; Shin-Wu Liu; Bart L Staker; Rama Mishra; John Thurmond; Gregory Michaud; Dawn R Mattoon; John Printen; Jeffery Christensen; Jon Mar Bjornsson; Brian A Pollok; Megerditch Kiledjian; Lance Stewart; Jill Jarecki; Mark E Gurney
Journal:  ACS Chem Biol       Date:  2008-11-21       Impact factor: 5.100

9.  Affinity resins containing enzymatically resistant mRNA cap analogs--a new tool for the analysis of cap-binding proteins.

Authors:  Sylwia Anna Szczepaniak; Joanna Zuberek; Edward Darzynkiewicz; Joanna Kufel; Jacek Jemielity
Journal:  RNA       Date:  2012-05-15       Impact factor: 4.942

Review 10.  XRN 5'→3' exoribonucleases: structure, mechanisms and functions.

Authors:  Vinay K Nagarajan; Christopher I Jones; Sarah F Newbury; Pamela J Green
Journal:  Biochim Biophys Acta       Date:  2013-03-19
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