Literature DB >> 16252963

Pore nucleation in mechanically stretched bilayer membranes.

Zun-Jing Wang1, Daan Frenkel.   

Abstract

We report a computer-simulation study of the free-energy barrier for the nucleation of pores in the bilayer membrane under constant stretching lateral pressure. We find that incipient pores are hydrophobic but as the lateral size of the pore nucleus becomes comparable with the molecular length, the pore becomes hydrophilic. In agreement with previous investigations, we find that the dynamical process of growth and closure of hydrophilic pores is controlled by the competition between the surface tension of the membrane and the line tension associated with the rim of the pore. We estimate the line tension of a hydrophilic pore from the shape of the computed free-energy barriers. The line tension thus computed is in a good agreement with available experimental data. We also estimate the line tension of hydrophobic pores at both macroscopic and microscopic levels. The comparison of line tensions at these two different levels indicates that the "microscopic" line tension should be carefully distinguished from the "macroscopic" effective line tension used in the theoretical analysis of pore nucleation. The overall shape of the free-energy barrier for pore nucleation shows no indication for the existence of a metastable intermediate during pore nucleation.

Mesh:

Substances:

Year:  2005        PMID: 16252963     DOI: 10.1063/1.2060666

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  14 in total

1.  Electroelastic coupling between membrane surface fluctuations and membrane-embedded charges: continuum multidielectric treatment.

Authors:  Gennady V Miloshevsky; Ahmed Hassanein; Michael B Partenskii; Peter C Jordan
Journal:  J Chem Phys       Date:  2010-06-21       Impact factor: 3.488

Review 2.  Toward understanding protocell mechanosensation.

Authors:  Daniel Balleza
Journal:  Orig Life Evol Biosph       Date:  2010-11-17       Impact factor: 1.950

3.  Pore formation in a lipid bilayer under a tension ramp: modeling the distribution of rupture tensions.

Authors:  Pierre-Alexandre Boucher; Béla Joós; Martin J Zuckermann; Luc Fournier
Journal:  Biophys J       Date:  2007-03-30       Impact factor: 4.033

4.  Probing Lipid Bilayers under Ionic Imbalance.

Authors:  Jiaqi Lin; Alfredo Alexander-Katz
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

5.  Systematic implicit solvent coarse-graining of bilayer membranes: lipid and phase transferability of the force field.

Authors:  Zun-Jing Wang; Markus Deserno
Journal:  New J Phys       Date:  2010-09-01       Impact factor: 3.729

Review 6.  The role of membrane tension in the action of antimicrobial peptides and cell-penetrating peptides in biomembranes.

Authors:  Moynul Hasan; Md Mizanur Rahman Moghal; Samiron Kumar Saha; Masahito Yamazaki
Journal:  Biophys Rev       Date:  2019-05-15

7.  Minimum energy path to membrane pore formation and rupture.

Authors:  Christina L Ting; Daniel Appelö; Zhen-Gang Wang
Journal:  Phys Rev Lett       Date:  2011-04-18       Impact factor: 9.161

8.  A systematically coarse-grained solvent-free model for quantitative phospholipid bilayer simulations.

Authors:  Zun-Jing Wang; Markus Deserno
Journal:  J Phys Chem B       Date:  2010-09-02       Impact factor: 2.991

9.  Simulations of skin barrier function: free energies of hydrophobic and hydrophilic transmembrane pores in ceramide bilayers.

Authors:  Rebecca Notman; Jamshed Anwar; W J Briels; Massimo G Noro; Wouter K den Otter
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

10.  Free energy of hydrophilic and hydrophobic pores in lipid bilayers by free energy perturbation of a restraint.

Authors:  Mayank Dixit; Themis Lazaridis
Journal:  J Chem Phys       Date:  2020-08-07       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.