Literature DB >> 16249265

GSMA: software implementation of the genome search meta-analysis method.

Fabio Pardi1, Douglas F Levinson, Cathryn M Lewis.   

Abstract

Meta-analysis can be used to pool results of genome-wide linkage scans. This is of great value in complex diseases, where replication of linked regions occurs infrequently. The genome search meta-analysis (GSMA) method is widely used for this analysis, and a computer program is now available to implement the GSMA.

Mesh：

Year:  2005        PMID： 16249265     DOI： 10.1093/bioinformatics/bti725

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  12 in total

1.  Meta-analysis of genome-wide scans provides evidence for sex- and site-specific regulation of bone mass.

Authors:  John Pa Ioannidis; Mandy Y Ng; Pak C Sham; Elias Zintzaras; Cathryn M Lewis; Hong-Wen Deng; Michael J Econs; David Karasik; Marcella Devoto; Candace M Kammerer; Tim Spector; Toby Andrew; L Adrienne Cupples; Emma L Duncan; Tatiana Foroud; Douglas P Kiel; Daniel Koller; Bente Langdahl; Braxton D Mitchell; Munro Peacock; Robert Recker; Hui Shen; Katia Sol-Church; Loretta D Spotila; Andre G Uitterlinden; Scott G Wilson; Annie Wc Kung; Stuart H Ralston
Journal:  J Bone Miner Res       Date:  2007-02       Impact factor: 6.741

2.  Meta-analysis of 20 genome-wide linkage studies evidenced new regions linked to asthma and atopy.

Authors:  Emmanuelle Bouzigon; Paola Forabosco; Gerard H Koppelman; William O C M Cookson; Marie-Hélène Dizier; David L Duffy; David M Evans; Manuel A R Ferreira; Juha Kere; Tarja Laitinen; Giovanni Malerba; Deborah A Meyers; Miriam Moffatt; Nicholas G Martin; Mandy Y Ng; Pier Franco Pignatti; Mathias Wjst; Francine Kauffmann; Florence Demenais; Cathryn M Lewis
Journal:  Eur J Hum Genet       Date:  2010-01-13       Impact factor: 4.246

3.  Meta-analysis of genome-wide linkage studies in celiac disease.

Authors:  Paola Forabosco; Susan L Neuhausen; Luigi Greco; Asa Torinsson Naluai; Cisca Wijmenga; Paivi Saavalainen; Richard S Houlston; Paul J Ciclitira; Marie-Claude Babron; Cathryn M Lewis
Journal:  Hum Hered       Date:  2009-07-22       Impact factor: 0.444

4.  Novel non-HLA-susceptible regions determined by meta-analysis of four genomewide scans for ankylosing spondylitis.

Authors:  Jinxian Huang; Chao Li; Haixia Xu; Jieruo Gu
Journal:  J Genet       Date:  2008-04       Impact factor: 1.166

5.  Meta-analysis of genome-wide linkage scans of attention deficit hyperactivity disorder.

Authors:  Kaixin Zhou; Astrid Dempfle; Mauricio Arcos-Burgos; Steven C Bakker; Tobias Banaschewski; Joseph Biederman; Jan Buitelaar; F Xavier Castellanos; Alysa Doyle; Richard P Ebstein; Jenny Ekholm; Paola Forabosco; Barbara Franke; Christine Freitag; Susann Friedel; Michael Gill; Johannes Hebebrand; Anke Hinney; Christian Jacob; Klaus Peter Lesch; Sandra K Loo; Francisco Lopera; James T McCracken; James J McGough; Jobst Meyer; Eric Mick; Ana Miranda; Maximilian Muenke; Fernando Mulas; Stanley F Nelson; T Trang Nguyen; Robert D Oades; Matthew N Ogdie; Juan David Palacio; David Pineda; Andreas Reif; Tobias J Renner; Herbert Roeyers; Marcel Romanos; Aribert Rothenberger; Helmut Schäfer; Joseph Sergeant; Richard J Sinke; Susan L Smalley; Edmund Sonuga-Barke; Hans-Christoph Steinhausen; Emma van der Meulen; Susanne Walitza; Andreas Warnke; Cathryn M Lewis; Stephen V Faraone; Philip Asherson
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2008-12-05       Impact factor: 3.568

6.  Analysis of susceptible genes and chromosome loci for lung cancers by automated gene prediction tools and genome scanning meta-analysis.

Authors:  Yu Tian; Daoxin Wang
Journal:  Int J Clin Exp Pathol       Date:  2015-09-01

7.  Meta-analysis of genome-wide linkage studies across autoimmune diseases.

Authors:  Paola Forabosco; Emmanuelle Bouzigon; Mandy Y Ng; Jane Hermanowski; Sheila A Fisher; Lindsey A Criswell; Cathryn M Lewis
Journal:  Eur J Hum Genet       Date:  2008-09-10       Impact factor: 4.246

8.  Meta-analysis of 15 genome-wide linkage scans of smoking behavior.

Authors:  Shizhong Han; Joel Gelernter; Xingguang Luo; Bao-Zhu Yang
Journal:  Biol Psychiatry       Date:  2010-01-01       Impact factor: 13.382

9.  Refining genome-wide linkage intervals using a meta-analysis of genome-wide association studies identifies loci influencing personality dimensions.

Authors:  Najaf Amin; Jouke-Jan Hottenga; Narelle K Hansell; A Cecile J W Janssens; Marleen H M de Moor; Pamela A F Madden; Irina V Zorkoltseva; Brenda W Penninx; Antonio Terracciano; Manuela Uda; Toshiko Tanaka; Tonu Esko; Anu Realo; Luigi Ferrucci; Michelle Luciano; Gail Davies; Andres Metspalu; Goncalo R Abecasis; Ian J Deary; Katri Raikkonen; Laura J Bierut; Paul T Costa; Viatcheslav Saviouk; Gu Zhu; Anatoly V Kirichenko; Aaron Isaacs; Yurii S Aulchenko; Gonneke Willemsen; Andrew C Heath; Michele L Pergadia; Sarah E Medland; Tatiana I Axenovich; Eco de Geus; Grant W Montgomery; Margaret J Wright; Ben A Oostra; Nicholas G Martin; Dorret I Boomsma; Cornelia M van Duijn
Journal:  Eur J Hum Genet       Date:  2012-12-05       Impact factor: 4.246

10.  Meta-analysis of 32 genome-wide linkage studies of schizophrenia.

Authors:  M Y M Ng; D F Levinson; S V Faraone; B K Suarez; L E DeLisi; T Arinami; B Riley; T Paunio; A E Pulver; P A Holmans; M Escamilla; D B Wildenauer; N M Williams; C Laurent; B J Mowry; L M Brzustowicz; M Maziade; P Sklar; D L Garver; G R Abecasis; B Lerer; M D Fallin; H M D Gurling; P V Gejman; E Lindholm; H W Moises; W Byerley; E M Wijsman; P Forabosco; M T Tsuang; H-G Hwu; Y Okazaki; K S Kendler; B Wormley; A Fanous; D Walsh; F A O'Neill; L Peltonen; G Nestadt; V K Lasseter; K Y Liang; G M Papadimitriou; D G Dikeos; S G Schwab; M J Owen; M C O'Donovan; N Norton; E Hare; H Raventos; H Nicolini; M Albus; W Maier; V L Nimgaonkar; L Terenius; J Mallet; M Jay; S Godard; D Nertney; M Alexander; R R Crowe; J M Silverman; A S Bassett; M-A Roy; C Mérette; C N Pato; M T Pato; J Louw Roos; Y Kohn; D Amann-Zalcenstein; G Kalsi; A McQuillin; D Curtis; J Brynjolfson; T Sigmundsson; H Petursson; A R Sanders; J Duan; E Jazin; M Myles-Worsley; M Karayiorgou; C M Lewis
Journal:  Mol Psychiatry       Date:  2008-12-30       Impact factor: 15.992
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