Literature DB >> 16247502

Autophagy: molecular machinery for self-eating.

T Yorimitsu1, D J Klionsky.   

Abstract

Autophagy is a highly conserved process in eukaryotes in which the cytoplasm, including excess or aberrant organelles, is sequestered into double-membrane vesicles and delivered to the degradative organelle, the lysosome/vacuole, for breakdown and eventual recycling of the resulting macromolecules. This process has an important role in various biological events such as adaptation to changing environmental conditions, cellular remodeling during development and differentiation, and determination of lifespan. Auto-phagy is also involved in preventing certain types of disease, although it may contribute to some pathologies. Recent studies have identified many components that are required to drive this complicated cellular process. Auto-phagy-related genes were first identified in yeast, but homologs are found in all eukaryotes. Analyses in a range of model systems have provided huge advances toward understanding the molecular basis of autophagy. Here we review our current knowledge on the machinery and molecular mechanism of autophagy.

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Year:  2005        PMID: 16247502      PMCID: PMC1828868          DOI: 10.1038/sj.cdd.4401765

Source DB:  PubMed          Journal:  Cell Death Differ        ISSN: 1350-9047            Impact factor:   15.828


  88 in total

Review 1.  Autophagy in the eukaryotic cell.

Authors:  Fulvio Reggiori; Daniel J Klionsky
Journal:  Eukaryot Cell       Date:  2002-02

2.  Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway.

Authors:  Takahiro Shintani; Wei-Pang Huang; Per E Stromhaug; Daniel J Klionsky
Journal:  Dev Cell       Date:  2002-12       Impact factor: 12.270

3.  The Ccz1-Mon1 protein complex is required for the late step of multiple vacuole delivery pathways.

Authors:  Chao-Wen Wang; Per E Stromhaug; Jun Shima; Daniel J Klionsky
Journal:  J Biol Chem       Date:  2002-10-02       Impact factor: 5.157

4.  Studies of cargo delivery to the vacuole mediated by autophagosomes in Saccharomyces cerevisiae.

Authors:  Kuninori Suzuki; Yoshiaki Kamada; Yoshinori Ohsumi
Journal:  Dev Cell       Date:  2002-12       Impact factor: 12.270

5.  Selective autophagy of peroxisomes in methylotrophic yeasts.

Authors:  D L Tuttle; A S Lewin; W A Dunn
Journal:  Eur J Cell Biol       Date:  1993-04       Impact factor: 4.492

6.  Retromer and the sorting nexins Snx4/41/42 mediate distinct retrieval pathways from yeast endosomes.

Authors:  Ewald H Hettema; Michael J Lewis; Michael W Black; Hugh R B Pelham
Journal:  EMBO J       Date:  2003-02-03       Impact factor: 11.598

7.  Degradation and turnover of peroxisomes in the yeast Hansenula polymorpha induced by selective inactivation of peroxisomal enzymes.

Authors:  M Veenhuis; A Douma; W Harder; M Osumi
Journal:  Arch Microbiol       Date:  1983-06       Impact factor: 2.552

8.  Aminopeptidase I of Saccharomyces cerevisiae is localized to the vacuole independent of the secretory pathway.

Authors:  D J Klionsky; R Cueva; D S Yaver
Journal:  J Cell Biol       Date:  1992-10       Impact factor: 10.539

9.  Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction.

Authors:  K Takeshige; M Baba; S Tsuboi; T Noda; Y Ohsumi
Journal:  J Cell Biol       Date:  1992-10       Impact factor: 10.539

10.  Novel PtdIns(3)P-binding protein Etf1 functions as an effector of the Vps34 PtdIns 3-kinase in autophagy.

Authors:  Andrew E Wurmser; Scott D Emr
Journal:  J Cell Biol       Date:  2002-08-19       Impact factor: 10.539

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  557 in total

Review 1.  Regulation of autophagy by protein post-translational modification.

Authors:  Willayat Yousuf Wani; Michaël Boyer-Guittaut; Matthew Dodson; John Chatham; Victor Darley-Usmar; Jianhua Zhang
Journal:  Lab Invest       Date:  2014-11-03       Impact factor: 5.662

2.  Blocking NF-κB nuclear translocation leads to p53-related autophagy activation and cell apoptosis.

Authors:  Bao-Song Zhu; Chun-Gen Xing; Fang Lin; Xiao-Qing Fan; Kui Zhao; Zheng-Hong Qin
Journal:  World J Gastroenterol       Date:  2011-01-28       Impact factor: 5.742

Review 3.  The elimination of accumulated and aggregated proteins: a role for aggrephagy in neurodegeneration.

Authors:  Ai Yamamoto; Anne Simonsen
Journal:  Neurobiol Dis       Date:  2010-08-20       Impact factor: 5.996

4.  Heteromultimeric TRPML channel assemblies play a crucial role in the regulation of cell viability models and starvation-induced autophagy.

Authors:  David A Zeevi; Shaya Lev; Ayala Frumkin; Baruch Minke; Gideon Bach
Journal:  J Cell Sci       Date:  2010-08-24       Impact factor: 5.285

5.  A noncanonical mechanism of Nrf2 activation by autophagy deficiency: direct interaction between Keap1 and p62.

Authors:  Alexandria Lau; Xiao-Jun Wang; Fei Zhao; Nicole F Villeneuve; Tongde Wu; Tao Jiang; Zheng Sun; Eileen White; Donna D Zhang
Journal:  Mol Cell Biol       Date:  2010-04-26       Impact factor: 4.272

Review 6.  Autophagy in protists.

Authors:  Michael Duszenko; Michael L Ginger; Ana Brennand; Melisa Gualdrón-López; María Isabel Colombo; Graham H Coombs; Isabelle Coppens; Bamini Jayabalasingham; Gordon Langsley; Solange Lisboa de Castro; Rubem Menna-Barreto; Jeremy C Mottram; Miguel Navarro; Daniel J Rigden; Patricia S Romano; Veronika Stoka; Boris Turk; Paul A M Michels
Journal:  Autophagy       Date:  2011-02-01       Impact factor: 16.016

7.  HDLs inhibit endoplasmic reticulum stress and autophagic response induced by oxidized LDLs.

Authors:  C Muller; R Salvayre; A Nègre-Salvayre; C Vindis
Journal:  Cell Death Differ       Date:  2010-11-26       Impact factor: 15.828

Review 8.  Rubicon: LC3-associated phagocytosis and beyond.

Authors:  Sing-Wai Wong; Payel Sil; Jennifer Martinez
Journal:  FEBS J       Date:  2017-12-29       Impact factor: 5.542

Review 9.  Autophagy and neurodegeneration.

Authors:  Annamaria Ventruti; Ana Maria Cuervo
Journal:  Curr Neurol Neurosci Rep       Date:  2007-09       Impact factor: 5.081

10.  Heat shock factor 1 (HSF1) controls chemoresistance and autophagy through transcriptional regulation of autophagy-related protein 7 (ATG7).

Authors:  Shruti Desai; Zixing Liu; Jun Yao; Nishant Patel; Jieqing Chen; Yun Wu; Erin Eun-Young Ahn; Oystein Fodstad; Ming Tan
Journal:  J Biol Chem       Date:  2013-02-05       Impact factor: 5.157

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