Literature DB >> 16243972

Light scattered by model phantom bacteria reveals molecular interactions at their surface.

A Ghetta1, D Prosperi, F Mantegazza, L Panza, S Riva, T Bellini.   

Abstract

Testing molecular interactions is an ubiquitous need in modern biology and molecular medicine. Here, we present a qualitative and quantitative method rooted in the basic properties of the scattering of light, enabling detailed measurement of ligand-receptor interactions occurring on the surface of colloids. The key factor is the use of receptor-coated nanospheres matched in refractive index with water and therefore optically undetectable ("phantom") when not involved in adhesion processes. At the occurrence of ligand binding at the receptor sites, optically unmatched material adsorbs on the nanoparticle surface, giving rise to an increment in their scattering cross section up to a maximum corresponding to saturated binding sites. The analysis of the scattering growth pattern enables extracting the binding affinity. This label-free method has been assessed through the determination of the binding constant of the antibiotic vancomycin with the tripeptide l-Lys-d-Ala-d-Ala and of the vancomycin dimerization constant. We shed light on the role of chelate effect and molecular hindrance in the activity of this glycopeptide.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16243972      PMCID: PMC1276067          DOI: 10.1073/pnas.0505877102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  Binding of vancomycin group antibiotics to D-alanine and D-lactate presenting self-assembled monolayers.

Authors:  M A Cooper; M T Fiorini; C Abell; D H Williams
Journal:  Bioorg Med Chem       Date:  2000-11       Impact factor: 3.641

2.  Detection of molecular interactions at membrane surfaces through colloid phase transitions.

Authors:  Michael M Baksh; Michal Jaros; Jay T Groves
Journal:  Nature       Date:  2004-01-08       Impact factor: 49.962

Review 3.  Optical biosensors in drug discovery.

Authors:  Matthew A Cooper
Journal:  Nat Rev Drug Discov       Date:  2002-07       Impact factor: 84.694

4.  Binding of glycopeptide antibiotics to a model of a vancomycin-resistant bacterium.

Authors:  M A Cooper; D H Williams
Journal:  Chem Biol       Date:  1999-12

5.  The role of hydrophobic side chains as determinants of antibacterial activity of semisynthetic glycopeptide antibiotics.

Authors:  N E Allen; D L LeTourneau; J N Hobbs
Journal:  J Antibiot (Tokyo)       Date:  1997-08       Impact factor: 2.649

Review 6.  Use of surface plasmon resonance to probe the equilibrium and dynamic aspects of interactions between biological macromolecules.

Authors:  P Schuck
Journal:  Annu Rev Biophys Biomol Struct       Date:  1997

7.  Chemistry, Biology, and Medicine of the Glycopeptide Antibiotics.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  1999-08       Impact factor: 15.336

Review 8.  The structural biology of molecular recognition by vancomycin.

Authors:  P J Loll; P H Axelsen
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000

Review 9.  Vancomycin assembly: nature's way.

Authors:  Brian K Hubbard; Christopher T Walsh
Journal:  Angew Chem Int Ed Engl       Date:  2003-02-17       Impact factor: 15.336

10.  Modifications of the acyl-D-alanyl-D-alanine terminus affecting complex-formation with vancomycin.

Authors:  M Nieto; H R Perkins
Journal:  Biochem J       Date:  1971-08       Impact factor: 3.857

View more
  2 in total

1.  Multispot, label-free biodetection at a phantom plastic-water interface.

Authors:  Fabio Giavazzi; Matteo Salina; Roberto Cerbino; Mattia Bassi; Davide Prosperi; Erica Ceccarello; Francesco Damin; Laura Sola; Marco Rusnati; Marcella Chiari; Bice Chini; Tommaso Bellini; Marco Buscaglia
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-21       Impact factor: 11.205

2.  Host-guest chemistry of the peptidoglycan.

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  J Med Chem       Date:  2010-07-08       Impact factor: 7.446

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.