Literature DB >> 16239477

Interlinked fast and slow positive feedback loops drive reliable cell decisions.

Onn Brandman1, James E Ferrell, Rong Li, Tobias Meyer.   

Abstract

Positive feedback is a ubiquitous signal transduction motif that allows systems to convert graded inputs into decisive, all-or-none outputs. Here we investigate why the positive feedback switches that regulate polarization of budding yeast, calcium signaling, Xenopus oocyte maturation, and various other processes use multiple interlinked loops rather than single positive feedback loops. Mathematical simulations revealed that linking fast and slow positive feedback loops creates a "dual-time" switch that is both rapidly inducible and resistant to noise in the upstream signaling system.

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Year:  2005        PMID: 16239477      PMCID: PMC3175767          DOI: 10.1126/science.1113834

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  Construction of a genetic toggle switch in Escherichia coli.

Authors:  T S Gardner; C R Cantor; J J Collins
Journal:  Nature       Date:  2000-01-20       Impact factor: 49.962

Review 2.  Calcium signaling mechanisms in T lymphocytes.

Authors:  R S Lewis
Journal:  Annu Rev Immunol       Date:  2001       Impact factor: 28.527

3.  Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion.

Authors:  A Becskei; B Séraphin; L Serrano
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

4.  Structural evidence for feedback activation by Ras.GTP of the Ras-specific nucleotide exchange factor SOS.

Authors:  S Mariana Margarit; Holger Sondermann; Brian E Hall; Bhushan Nagar; Andre Hoelz; Michelle Pirruccello; Dafna Bar-Sagi; John Kuriyan
Journal:  Cell       Date:  2003-03-07       Impact factor: 41.582

5.  Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible.

Authors:  James E. Ferrell; Wen Xiong
Journal:  Chaos       Date:  2001-03       Impact factor: 3.642

Review 6.  The p53 pathway: positive and negative feedback loops.

Authors:  Sandra L Harris; Arnold J Levine
Journal:  Oncogene       Date:  2005-04-18       Impact factor: 9.867

7.  Enhancement of cellular memory by reducing stochastic transitions.

Authors:  Murat Acar; Attila Becskei; Alexander van Oudenaarden
Journal:  Nature       Date:  2005-05-12       Impact factor: 49.962

Review 8.  The CLN gene family: central regulators of cell cycle Start in budding yeast.

Authors:  K Levine; A H Tinkelenberg; F Cross
Journal:  Prog Cell Cycle Res       Date:  1995

9.  Autocrine loops with positive feedback enable context-dependent cell signaling.

Authors:  S Y Shvartsman; M P Hagan; A Yacoub; P Dent; H S Wiley; D A Lauffenburger
Journal:  Am J Physiol Cell Physiol       Date:  2002-03       Impact factor: 4.249

10.  Robust cell polarity is a dynamic state established by coupling transport and GTPase signaling.

Authors:  Roland Wedlich-Soldner; Stephanie C Wai; Thomas Schmidt; Rong Li
Journal:  J Cell Biol       Date:  2004-09-07       Impact factor: 10.539

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  190 in total

Review 1.  Microfluidic technologies for temporal perturbations of chemotaxis.

Authors:  Daniel Irimia
Journal:  Annu Rev Biomed Eng       Date:  2010-08-15       Impact factor: 9.590

2.  Autoregulation of Musashi1 mRNA translation during Xenopus oocyte maturation.

Authors:  Karthik Arumugam; Melanie C Macnicol; Angus M Macnicol
Journal:  Mol Reprod Dev       Date:  2012-07-09       Impact factor: 2.609

3.  Negative feedback from maternal signals reduces false alarms by collectively signalling offspring.

Authors:  Jennifer A Hamel; Reginald B Cocroft
Journal:  Proc Biol Sci       Date:  2012-07-11       Impact factor: 5.349

4.  The sensitivity of memory consolidation and reconsolidation to inhibitors of protein synthesis and kinases: computational analysis.

Authors:  Yili Zhang; Paul Smolen; Douglas A Baxter; John H Byrne
Journal:  Learn Mem       Date:  2010-08-24       Impact factor: 2.460

5.  Spatial positive feedback at the onset of mitosis.

Authors:  Silvia D M Santos; Roy Wollman; Tobias Meyer; James E Ferrell
Journal:  Cell       Date:  2012-06-22       Impact factor: 41.582

6.  Design of a bistable switch to control cellular uptake.

Authors:  Diego A Oyarzún; Madalena Chaves
Journal:  J R Soc Interface       Date:  2015-12-06       Impact factor: 4.118

7.  A hardwired HIV latency program.

Authors:  Brandon S Razooky; Anand Pai; Katherine Aull; Igor M Rouzine; Leor S Weinberger
Journal:  Cell       Date:  2015-02-26       Impact factor: 41.582

8.  Autogenous and nonautogenous control of response in a genetic network.

Authors:  Francisco M Camas; Jesús Blázquez; Juan F Poyatos
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-14       Impact factor: 11.205

9.  Boolean dynamics of biological networks with multiple coupled feedback loops.

Authors:  Yung-Keun Kwon; Kwang-Hyun Cho
Journal:  Biophys J       Date:  2007-01-26       Impact factor: 4.033

10.  Robust, tunable genetic memory from protein sequestration combined with positive feedback.

Authors:  Tatenda Shopera; William R Henson; Andrew Ng; Young Je Lee; Kenneth Ng; Tae Seok Moon
Journal:  Nucleic Acids Res       Date:  2015-09-17       Impact factor: 16.971

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