Literature DB >> 16232672

Purification and characterization of dibenzothiophene (DBT) sulfone monooxygenase, an enzyme involved in DBT desulfurization, from Rhodococcus erythropolis D-1.

T Ohshiro1, T Kojima, K Torii, H Kawasoe, Y Izumi.   

Abstract

Dibenzothiophene (DBT), a model of organic sulfur compound in petroleum, is microbially desulfurized to 2-hydroxybiphenyl by Rhodococcus erythropolis D-1. Three desulfurization (Dsz) enzymes--DszC, A, and B--and flavin reductase are involved in sulfur-specific DBT desulfurization. In this study, DszA was purified, characterized, and crystallized from R. erythropolis D-1. DszA, DBT sulfone monooxygenase, is the second enzyme in microbial DBT desulfurization metabolism and catalyzes the conversion of DBT sulfone to 2'-hydroxybiphenyl 2-sulfinic acid in the presence of flavin reductase with cleavage of the carbon-sulfur bond in the DBT skeleton. Using anion-exchange column chromatography, the four enzyme fractions responsible for DBT desulfurization were separated, and DszA was then purified to homogeneity. Polygonal crystals of DszA were observed within a week. DszA was found to have a molecular mass of 97 kDa and to consist of two subunits with identical masses of 50 kDa. The N-terminal amino acid sequence of the purified DszA completely coincided with the deduced amino acid sequence for dszA of R. erythropolis IGTS8 except for a methionine residue at the latter N-terminal. The optimal temperature and pH for DszA activity were 35 degrees C and about 7.5. The activity of the enzyme was inhibited by Mn2+, Ni2+, 2,2'-bipyridine, and 8-quinolinol, suggesting that a metal might be involved in its activity. DszA acted on not only DBT sulfone but also on dibenz[c,e][1,2]oxathiin 6-oxide and dibenz[c,e][1,2]oxathiin 6,6-dioxide. Dihydroxybiphenyl was formed from the latter two substrates.

Entities:  

Year:  1999        PMID: 16232672     DOI: 10.1016/s1389-1723(00)87088-7

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  12 in total

1.  Substrate preferences in biodesulfurization of diesel range fuels by Rhodococcus sp. strain ECRD-1.

Authors:  Roger C Prince; Matthew J Grossman
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

2.  Evaluation of the Conformational Stability of Recombinant Desulfurizing Enzymes from a Newly Isolated Rhodococcus sp.

Authors:  Federica Parravicini; Stefania Brocca; Marina Lotti
Journal:  Mol Biotechnol       Date:  2016-01       Impact factor: 2.695

3.  Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1.

Authors:  T Matsubara; T Ohshiro; Y Nishina; Y Izumi
Journal:  Appl Environ Microbiol       Date:  2001-03       Impact factor: 4.792

4.  Degradation of mono-chlorinated dibenzo-p-dioxins by Janibacter sp. strain YA isolated from river sediment.

Authors:  Shoko Iwai; Atsushi Yamazoe; Ryosuke Takahashi; Futoshi Kurisu; Osami Yagi
Journal:  Curr Microbiol       Date:  2005-10-15       Impact factor: 2.188

5.  Core genome and plasmidome of the quorum-quenching bacterium Rhodococcus erythropolis.

Authors:  Anthony Kwasiborski; Samuel Mondy; Teik-Min Chong; Kok-Gan Chan; Amélie Beury-Cirou; Denis Faure
Journal:  Genetica       Date:  2015-02-13       Impact factor: 1.082

6.  Biodesulfurization of naphthothiophene and benzothiophene through selective cleavage of carbon-sulfur bonds by Rhodococcus sp. strain WU-K2R.

Authors:  Kohtaro Kirimura; Toshiki Furuya; Rika Sato; Yoshitaka Ishii; Kuniki Kino; Shoji Usami
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

7.  Biodegradation of the organic disulfide 4,4'-dithiodibutyric acid by Rhodococcus spp.

Authors:  Heba Khairy; Jan Hendrik Wübbeler; Alexander Steinbüchel
Journal:  Appl Environ Microbiol       Date:  2015-09-25       Impact factor: 4.792

8.  Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.

Authors:  Tomoya Hino; Haruka Hamamoto; Hirokazu Suzuki; Hisashi Yagi; Takashi Ohshiro; Shingo Nagano
Journal:  J Biol Chem       Date:  2017-08-02       Impact factor: 5.157

9.  Structural and Biochemical Characterization of BdsA from Bacillus subtilis WU-S2B, a Key Enzyme in the "4S" Desulfurization Pathway.

Authors:  Tiantian Su; Jing Su; Shiheng Liu; Conggang Zhang; Jing He; Yan Huang; Sujuan Xu; Lichuan Gu
Journal:  Front Microbiol       Date:  2018-02-15       Impact factor: 5.640

10.  Evidence for the role of zinc on the performance of dibenzothiophene desulfurization by Gordonia alkanivorans strain 1B.

Authors:  Luís Alves; José Matos; Rogério Tenreiro; Francisco M Gírio
Journal:  J Ind Microbiol Biotechnol       Date:  2007-11-28       Impact factor: 4.258

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