Literature DB >> 16230482

Bioinformatic analysis of circadian gene oscillation in mouse aorta.

R Daniel Rudic1, Peter McNamara, Dermot Reilly, Tilo Grosser, Anne-Marie Curtis, Thomas S Price, Satchidananda Panda, John B Hogenesch, Garret A FitzGerald.   

Abstract

BACKGROUND: Circadian rhythmicity of many aspects of cardiovascular function-blood pressure, coagulation and contractile function-is well established, as is diurnal variation in important clinical events, such as myocardial infarction and stroke. Here, we undertake studies to globally assess circadian gene expression in murine aorta. METHODS AND
RESULTS: Aortae from mice were harvested at 4-hour intervals for 2 circadian cycles (48 hours). Gene expression was assessed by expression profiling and subjected to a gene ontology bioinformatics analysis. Three hundred thirty transcripts exhibited a circadian pattern of oscillation in mouse aorta, including those intrinsic to the function of the molecular clock. In addition, many genes relevant to protein folding, protein degradation, glucose and lipid metabolism, adipocyte maturation, vascular integrity, and the response to injury are also included in this subset of roughly 7000 genes screened for circadian oscillation.
CONCLUSIONS: Detection of functional cassettes of vascular genes that exhibit circadian regulation in the mouse will facilitate elucidation of the mechanisms by which the molecular clock may interact with environmental variables to modulate cardiovascular function and the response to therapeutic interventions.

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Year:  2005        PMID: 16230482     DOI: 10.1161/CIRCULATIONAHA.105.568626

Source DB:  PubMed          Journal:  Circulation        ISSN: 0009-7322            Impact factor:   29.690


  58 in total

1.  Altered clock gene expression and vascular smooth muscle diurnal contractile variations in type 2 diabetic db/db mice.

Authors:  Wen Su; Zhongwen Xie; Zhenheng Guo; Marilyn J Duncan; Jenny Lutshumba; Ming C Gong
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Review 2.  Rev-erb-alpha: an integrator of circadian rhythms and metabolism.

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Review 4.  Circadian clocks and vascular function.

Authors:  Georgios K Paschos; Garret A FitzGerald
Journal:  Circ Res       Date:  2010-03-19       Impact factor: 17.367

Review 5.  Time-restricted feeding for prevention and treatment of cardiometabolic disorders.

Authors:  Girish C Melkani; Satchidananda Panda
Journal:  J Physiol       Date:  2017-04-25       Impact factor: 5.182

Review 6.  Role of the circadian system in cardiovascular disease.

Authors:  Saurabh S Thosar; Matthew P Butler; Steven A Shea
Journal:  J Clin Invest       Date:  2018-06-01       Impact factor: 14.808

7.  Expression of the CLOCK, BMAL1, and PER1 circadian genes in human oral mucosa cells as dependent on CLOCK gene polymorphic variants.

Authors:  I V Kurbatova; S N Kolomeichuk; L V Topchieva; V A Korneva; N N Nemova
Journal:  Dokl Biol Sci       Date:  2012-11-06

8.  Conditional Deletion of Bmal1 Accentuates Microvascular and Macrovascular Injury.

Authors:  Ashay D Bhatwadekar; Eleni Beli; Yanpeng Diao; Jonathan Chen; Qianyi Luo; Alpha Alex; Sergio Caballero; James M Dominguez; Tatiana E Salazar; Julia V Busik; Mark S Segal; Maria B Grant
Journal:  Am J Pathol       Date:  2017-04-19       Impact factor: 4.307

9.  Inference of gene regulatory networks using time-series data: a survey.

Authors:  Chao Sima; Jianping Hua; Sungwon Jung
Journal:  Curr Genomics       Date:  2009-09       Impact factor: 2.236

10.  Vascular PPARgamma controls circadian variation in blood pressure and heart rate through Bmal1.

Authors:  Ningning Wang; Guangrui Yang; Zhanjun Jia; Hui Zhang; Toshinori Aoyagi; Sunhapas Soodvilai; J David Symons; Jurgen B Schnermann; Frank J Gonzalez; Sheldon E Litwin; Tianxin Yang
Journal:  Cell Metab       Date:  2008-12       Impact factor: 27.287

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