Literature DB >> 16229477

Erythropoietin unfolding: thermodynamics and its correlation with structural features.

Jurij Lah1, Iztok Prislan, Blaz Krzan, Mateja Salobir, Andrej Francky, Gorazd Vesnaver.   

Abstract

Human erythropoietin (EPO) is a glycoprotein hormone considered to be the principal regulator of red blood cell formation. Although its recombinant version (rEPO) has been widely used for treatment of various anemias and its biological effects are relatively well-known, we know little about its biophysical properties and their relation to its structure. To gain a fuller understanding of the structural and functional properties of rEPO on the molecular level we followed its thermal and urea-induced unfolding at different pH (3.1-9.4) and urea concentrations (0-8 M) using spectropolarimetry, UV absorption, intrinsic emission fluorescence, and differential scanning calorimetry. Our results show that under a variety of conditions rEPO undergoes thermal or urea-induced denaturation that may be considered as a reversible two-state process characterized by unusually high (thermal) or moderate (urea-induced) extent of the residual structure. The highest thermal stability of the protein observed in aqueous solutions at physiological pH appears to be due to the largest difference in the extent of structure in the denatured and native state at this pH. The comparison between experimentally determined energetics of rEPO denaturation and its structure-based calculations indicates that the parametrization of thermodynamic quantities in terms of changes in solvent accessible nonpolar and polar surface areas resulting from protein unfolding can be successfully used provided that these changes are estimated from combination of experimentally determined deltaC(o)p and deltaH(o) values and not calculated from the structure of the protein's folded and assumingly fully unfolded state.

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Year:  2005        PMID: 16229477     DOI: 10.1021/bi0512952

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Driving forces of gyrase recognition by the addiction toxin CcdB.

Authors:  Mario Simic; Natalie De Jonge; Remy Loris; Gorazd Vesnaver; Jurij Lah
Journal:  J Biol Chem       Date:  2009-05-22       Impact factor: 5.157

2.  Kinetic folding mechanism of erythropoietin.

Authors:  Douglas D Banks; Joanna L Scavezze; Christine C Siska
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

3.  Nonspecific shielding of unfavorable electrostatic intramolecular interactions in the erythropoietin native-state increase conformational stability and limit non-native aggregation.

Authors:  Douglas D Banks
Journal:  Protein Sci       Date:  2015-04-11       Impact factor: 6.725

4.  DNA duplex stability: the role of preorganized electrostatics.

Authors:  Urban Bren; Jurij Lah; Matevz Bren; Václav Martínek; Jan Florián
Journal:  J Phys Chem B       Date:  2010-03-04       Impact factor: 2.991

5.  What drives the binding of minor groove-directed ligands to DNA hairpins?

Authors:  Jurij Lah; Igor Drobnak; Marko Dolinar; Gorazd Vesnaver
Journal:  Nucleic Acids Res       Date:  2007-12-17       Impact factor: 16.971

  5 in total

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