Literature DB >> 16228573

;Every dogma has its day': a personal look at carbon metabolism in photosynthetic bacteria.

John Ormerod1.   

Abstract

Dogmas are unscientific. What is perhaps the greatest biological dogma of all time, the 'unity of biochemistry' is, in the main, still having its day. According to present knowledge, the exceptions to this dogma are mere details when seen in relation to the biosystem as a whole. Nevertheless the exceptions are scientifically interesting and the understanding of them has led to a better comprehension of photosynthesis and ecology. Until the discovery of (14)C, photosynthetic CO(2) fixation was like a slightly opened black box. With (14)C in hand scientists mapped out the path of carbon in green plant photosynthesis in the course of a few years. The impressive reductive pentose phosphate cycle was almost immediately assumed to be universal in autotrophs, including anoxygenic phototrophs, in spite of the odd observation to the contrary. A new dogma was born and held the field for about two decades. Events began to turn when green sulfur bacteria were found to contain ferredoxin-coupled ketoacid-oxidoreductases. This led to the formulation of a novel CO(2)-fixing pathway, the reductive citric acid cycle, but its general acceptance required much work by many investigators. However, the ice had now been broken and after some years a third mechanism of CO(2) fixation was discovered, this time in Chloroflexus,and then a fourth in the same genus. One consequence of these discoveries is that it has become apparent that oxygen is an important factor that determines the kind of CO(2)-fixing mechanism an organism uses. With the prospect of the characterization of hordes of novel bacteria forecast by molecular ecologists we can expect further distinctive CO(2) fixation mechanisms to turn up.

Entities:  

Year:  2003        PMID: 16228573     DOI: 10.1023/A:1024938531382

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  48 in total

1.  Fixation of carbon dioxide by extracts of the strict autotroph Thiobacillus denitrificans.

Authors:  P A TRUDINGER
Journal:  Biochem J       Date:  1956-10       Impact factor: 3.857

2.  On the culture and general physiology of the green sulfur bacteria.

Authors:  H LARSEN
Journal:  J Bacteriol       Date:  1952-08       Impact factor: 3.490

3.  [Fractionation of carbon isotopes by photoautotrophic microorganism with different carbon dioxide assimilation pathways].

Authors:  V A Bondar'; G I Gogotova; A M Ziakun
Journal:  Dokl Akad Nauk SSSR       Date:  1976-06-21

4.  Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation.

Authors:  Birgit E Alber; Georg Fuchs
Journal:  J Biol Chem       Date:  2002-01-30       Impact factor: 5.157

5.  Autotrophic CO(2) fixation by Chloroflexus aurantiacus: study of glyoxylate formation and assimilation via the 3-hydroxypropionate cycle.

Authors:  S Herter; J Farfsing; N Gad'On; C Rieder; W Eisenreich; A Bacher; G Fuchs
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

6.  Role of the reductive carboxylic acid cycle in a photosynthetic bacterium lacking ribulose I,5-diphosphate carboxylase.

Authors:  B B Buchanan; P Schürmann; K T Shanmugam
Journal:  Biochim Biophys Acta       Date:  1972

7.  Photoassimilation of acetate and the biosynthesis of amino acids by Chlorobium thiosulphatophilum.

Authors:  D S Hoare; J Gibson
Journal:  Biochem J       Date:  1964-06       Impact factor: 3.857

8.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

9.  Autotrophic carbon dioxide fixation in Acidianus brierleyi.

Authors:  M Ishii; T Miyake; T Satoh; H Sugiyama; Y Oshima; T Kodama; Y Igarashi
Journal:  Arch Microbiol       Date:  1996-12       Impact factor: 2.552

10.  Enzymes of a novel autotrophic CO2 fixation pathway in the phototrophic bacterium Chloroflexus aurantiacus, the 3-hydroxypropionate cycle.

Authors:  G Strauss; G Fuchs
Journal:  Eur J Biochem       Date:  1993-08-01
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  6 in total

1.  Time line of discoveries: anoxygenic bacterial photosynthesis.

Authors:  Howard Gest; Robert E Blankenship
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

2.  Both forward and reverse TCA cycles operate in green sulfur bacteria.

Authors:  Kuo-Hsiang Tang; Robert E Blankenship
Journal:  J Biol Chem       Date:  2010-07-22       Impact factor: 5.157

Review 3.  Ecological aspects of the distribution of different autotrophic CO2 fixation pathways.

Authors:  Ivan A Berg
Journal:  Appl Environ Microbiol       Date:  2011-01-07       Impact factor: 4.792

4.  Thioredoxin: an unexpected meeting place.

Authors:  Bob B Buchanan
Journal:  Photosynth Res       Date:  2007-07-19       Impact factor: 3.573

5.  The Arnon-Buchanan cycle: a retrospective, 1966-2016.

Authors:  Bob B Buchanan; Reidun Sirevåg; Georg Fuchs; Ruslan N Ivanovsky; Yasuo Igarashi; Masaharu Ishii; F Robert Tabita; Ivan A Berg
Journal:  Photosynth Res       Date:  2017-10-10       Impact factor: 3.573

6.  Salty sisters: The women of halophiles.

Authors:  Bonnie K Baxter; Nina Gunde-Cimerman; Aharon Oren
Journal:  Front Microbiol       Date:  2014-06-04       Impact factor: 5.640

  6 in total

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