Literature DB >> 16204819

Cooperativity can reduce stochasticity in intracellular calcium dynamics.

Kai Wang1, Wouter-Jan Rappel, Herbert Levine.   

Abstract

The opening of inositol (1,4,5)-triphosphate (IP(3)) receptors, clustered at discrete sites on the endoplasmic reticulum, can lead to large-scale intracellular calcium waves. Recent experiments in Xenopus oocytes have shown that the inter-wave intervals for these waves have a standard deviation that is much smaller than their mean and that the background calcium concentration exhibits a slow rise during the interwave interval. Using a simple mathematical model, we examine the possibility that this slow rise increases the cooperativity between the openings of the clusters. We find that our model, coupled to the usual assumption that the pumps on the endoplasmic reticulum are activated instantaneously, is unable to explain the observed data: the clusters are found to fire independently and the inter-wave interval distribution is a Poisson distribution with a standard deviation that is approximately equal to its mean. On the other hand, we find that incorporating pumps that slowly activate leads to a slow increase in the background calcium concentration which makes global events progressively more likely to occur. We show that this cooperativity results in much smaller standard deviations and inter-wave interval distributions that are clearly not Poisson distributions.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 16204819     DOI: 10.1088/1478-3967/1/1/003

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  6 in total

1.  Timescales of IP(3)-evoked Ca(2+) spikes emerge from Ca(2+) puffs only at the cellular level.

Authors:  Kevin Thurley; Ian F Smith; Stephen C Tovey; Colin W Taylor; Ian Parker; Martin Falcke
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  A nonlinear model of ionic wave propagation along microtubules.

Authors:  M V Satarić; D I Ilić; N Ralević; Jack Adam Tuszynski
Journal:  Eur Biophys J       Date:  2009-03-04       Impact factor: 1.733

3.  Stochastic initiation and termination of calcium-mediated triggered activity in cardiac myocytes.

Authors:  Zhen Song; Zhilin Qu; Alain Karma
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-03       Impact factor: 11.205

4.  Nonlinear ionic pulses along microtubules.

Authors:  D L Sekulić; B M Satarić; J A Tuszynski; M V Satarić
Journal:  Eur Phys J E Soft Matter       Date:  2011-05-23       Impact factor: 1.890

5.  Derivation of Ca2+ signals from puff properties reveals that pathway function is robust against cell variability but sensitive for control.

Authors:  Kevin Thurley; Martin Falcke
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-20       Impact factor: 11.205

6.  Long-Lasting Sparks: Multi-Metastability and Release Competition in the Calcium Release Unit Network.

Authors:  Zhen Song; Alain Karma; James N Weiss; Zhilin Qu
Journal:  PLoS Comput Biol       Date:  2016-01-05       Impact factor: 4.475

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.