Literature DB >> 16201751

Structural characterization of the proximal and distal histidine environment of cytoglobin and neuroglobin.

Hitomi Sawai1, Masatomo Makino, Yasuhisa Mizutani, Takehiro Ohta, Hiroshi Sugimoto, Tadayuki Uno, Norifumi Kawada, Katsutoshi Yoshizato, Teizo Kitagawa, Yoshitsugu Shiro.   

Abstract

Cytoglobin (Cgb) and neuroglobin (Ngb) are the first examples of hexacoordinated globins from humans and other vertebrates in which a histidine (His) residue at the sixth position of the heme iron is an endogenous ligand in both the ferric and ferrous forms. Static and time-resolved resonance Raman and FT-IR spectroscopic techniques were applied in examining the structures in the heme environment of these globins. Picosecond time-resolved resonance Raman (ps-TR3) spectroscopy of transient five-coordinate heme species produced by the photolysis of carbon monoxide (CO) adducts of Cgb and Ngb showed Fe-His stretching (nu(Fe-His)) bands at 229 and 221 cm(-1), respectively. No time-dependent shift in the nu(Fe-His) band of Cgb and Ngb was detected in the 20-1000 ps time domain, in contrast to the case of myoglobin (Mb). These spectroscopic data, combined with previously reported crystallographic data, suggest that the structure of the heme pocket in Cgb and Ngb is altered upon CO binding in a manner different from that of Mb and that the scales of the structural alteration are different for Cgb and Ngb. The structural property of the heme distal side of the ligand-bound forms was investigated by observing the sets of (nu(Fe-CO), nu(C-O), delta(Fe-C-O)) and (nu(Fe-NO), nu(N-O), delta(Fe-N-O)) for the CO and nitric oxide (NO) complexes of Cgb and Ngb. A comparison of the spectra of some distal mutants of Cgb (H81A, H81V, R84A, R84K, and R84T) and Ngb (H64A, H64V, K67A, K67R, and K67T) showed that the CO adducts of Cgb and Ngb contained three conformers and that the distal His (His81 in Cgb and His64 in Ngb) mainly contributes to the interconversion of the conformers. These structural characteristics of Cgb and Ngb are discussed in relation to their ligand binding and physiological properties.

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Year:  2005        PMID: 16201751     DOI: 10.1021/bi050997o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  21 in total

1.  Dynamic features of carboxy cytoglobin distal mutants investigated by molecular dynamics simulations.

Authors:  Cong Zhao; Weihong Du
Journal:  J Biol Inorg Chem       Date:  2016-02-03       Impact factor: 3.358

2.  Interaction of apoNeuroglobin with heme-Aβ complexes relevant to Alzheimer's disease.

Authors:  Manas Seal; Sheetal Uppal; Suman Kundu; Somdatta Ghosh Dey
Journal:  J Biol Inorg Chem       Date:  2015-02-08       Impact factor: 3.358

3.  Effects of distal mutation on the dynamic properties of carboxycytoglobin: a molecular dynamics simulation study.

Authors:  Cong Zhao; Bingbing Zhang; Weihong Du
Journal:  J Biol Inorg Chem       Date:  2013-09-14       Impact factor: 3.358

4.  Differential sensing of protein influences by NO and CO vibrations in heme adducts.

Authors:  Mohammed Ibrahim; Changliang Xu; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

5.  Cytoglobin, a novel member of the globin family, protects kidney fibroblasts against oxidative stress under ischemic conditions.

Authors:  Hiroshi Nishi; Reiko Inagi; Norifumi Kawada; Katsutoshi Yoshizato; Imari Mimura; Toshiro Fujita; Masaomi Nangaku
Journal:  Am J Pathol       Date:  2010-12-23       Impact factor: 4.307

6.  Cytoglobin is a stress-responsive hemoprotein expressed in the developing and adult brain.

Authors:  Pradeep P A Mammen; John M Shelton; Qiu Ye; Shane B Kanatous; Amanda J McGrath; James A Richardson; Daniel J Garry
Journal:  J Histochem Cytochem       Date:  2006-08-09       Impact factor: 2.479

Review 7.  The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

Authors:  F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2006-04-04       Impact factor: 3.358

8.  Globin-like proteins in Caenorhabditis elegans: in vivo localization, ligand binding and structural properties.

Authors:  Eva Geuens; David Hoogewijs; Marco Nardini; Evi Vinck; Alessandra Pesce; Laurent Kiger; Angela Fago; Lesley Tilleman; Sasha De Henau; Michael C Marden; Roy E Weber; Sabine Van Doorslaer; Jacques Vanfleteren; Luc Moens; Martino Bolognesi; Sylvia Dewilde
Journal:  BMC Biochem       Date:  2010-04-02       Impact factor: 4.059

9.  Neuroglobin dynamics observed with ultrafast 2D-IR vibrational echo spectroscopy.

Authors:  Haruto Ishikawa; Ilya J Finkelstein; Seongheun Kim; Kyungwon Kwak; Jean K Chung; Keisuke Wakasugi; Aaron M Massari; Michael D Fayer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-04       Impact factor: 11.205

Review 10.  Carbon monoxide, reactive oxygen signaling, and oxidative stress.

Authors:  Claude A Piantadosi
Journal:  Free Radic Biol Med       Date:  2008-05-28       Impact factor: 7.376

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