Literature DB >> 16199484

Species distinction in Irish populations of Quercus petraea and Q. robur: morphological versus molecular analyses.

Colin T Kelleher1, Trevor R Hodkinson, Gerry C Douglas, Daniel L Kelly.   

Abstract

BACKGROUND AND AIMS: Populations of oak (Quercus petraea and Q. robur) were investigated using morphological and molecular (AFLP) analyses to assess species distinction. The study aimed to describe species distinction in Irish oak populations and to situate this in a European context.
METHODS: Populations were sampled from across the range of the island of Ireland. Leaf morphological characters were analysed through clustering and ordination methods. Putative neutral molecular markers (AFLPs) were used to analyse the molecular variation. Cluster and ordination analyses were also performed on the AFLP markers in addition to calculations of genetic diversity and F-statisitcs. KEY
RESULTS: A notable divergence was uncovered between the morphological and molecular analyses. The morphological analysis clearly differentiated individuals into their respective species, whereas the molecular analysis did not. Twenty species-specific AFLP markers were observed from 123 plants in 24 populations but none of these was species-diagnostic. Principal Coordinate Analysis of the AFLP data revealed a clustering, across the first two axes, of individuals according to population rather than according to species. High F(ST) values calculated from AFLP markers also indicated population differentiation (F(ST) = 0.271). Species differentiation accounted for only 13 % of the variation in diversity compared with population differentiation, which accounted for 27 %.
CONCLUSIONS: The results show that neutral molecular variation is partitioned more strongly between populations than between species. Although this could indicate that the populations of Q. petraea and Q. robur studied may not be distinct species at a molecular level, it is proposed that the difficulty in distinguishing the species in Irish oak populations using AFLP markers is due to population differentiation masking species differences. This could result from non-random mating in small, fragmented woodland populations. Hybridization and introgression between the species could also have a significant role.

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Year:  2005        PMID: 16199484      PMCID: PMC4247074          DOI: 10.1093/aob/mci275

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  10 in total

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4.  Do island populations have less genetic variation than mainland populations?

Authors:  R Frankham
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5.  Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size.

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6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Estimation of fixation indices and gene diversities.

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8.  AFLP markers demonstrate local genetic differentiation between two indigenous oak species [ Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations.

Authors:  E. Coart; V. Lamote; M. De Loose; E. Van Bockstaele; P. Lootens; I. Roldán-Ruiz
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9.  Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. and Q. petraea (Matt.) Liebl.].

Authors:  Caroline Scotti-Saintagne; Stéphanie Mariette; Ilga Porth; Pablo G Goicoechea; Teresa Barreneche; Catherine Bodénès; Kornel Burg; Antoine Kremer
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10.  High nuclear genetic diversity, high levels of outcrossing and low differentiation among remnant populations of Quercus petraea at the margin of its range in Ireland.

Authors:  Graham Muir; Andrew J Lowe; Colin C Fleming; Claus Vogl
Journal:  Ann Bot       Date:  2004-04-21       Impact factor: 4.357

  10 in total
  4 in total

1.  Rampant gene exchange across a strong reproductive barrier between the annual sunflowers, Helianthus annuus and H. petiolaris.

Authors:  Yoko Yatabe; Nolan C Kane; Caroline Scotti-Saintagne; Loren H Rieseberg
Journal:  Genetics       Date:  2007-02-04       Impact factor: 4.562

2.  Pure species in a continuum of genetic and morphological variation: sympatric oaks at the edge of their range.

Authors:  Gemma E Beatty; W Ian Montgomery; Florentine Spaans; David G Tosh; Jim Provan
Journal:  Ann Bot       Date:  2016-02-29       Impact factor: 4.357

3.  Coincidence of small-scale spatial discontinuities in leaf morphology and nuclear microsatellite variation of Quercus petraea and Q. robur in a mixed forest.

Authors:  F Gugerli; J-C Walser; K Dounavi; R Holderegger; R Finkeldey
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Review 4.  DNA banking for plant breeding, biotechnology and biodiversity evaluation.

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  4 in total

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