Literature DB >> 16191143

"Where do we teach what?" Finding broad concepts in the medical school curriculum.

Joshua C Denny1, Jeffrey D Smithers, Brian Armstrong, Anderson Spickard.   

Abstract

BACKGROUND: Often, medical educators and students do not know where important concepts are taught and learned in medical school. Manual efforts to identify and track concepts covered across the curriculum are inaccurate and resource intensive.
OBJECTIVE: To test the ability of a web-based application called KnowledgeMap (KM) to automatically locate where broad biomedical concepts are covered in lecture documents in the Vanderbilt School of Medicine.
METHODS: In 2003, the authors derived a gold standard set of curriculum documents by ranking 383 lecture documents as high, medium, or low relevance in their coverage of 4 broad biomedical concepts: genetics, women's health, dermatology, and radiology. We compared the gold standard rankings to KM, an automated tool that generates a variable number of subconcepts for each broad concept to calculate a relevance score for each document. Receiver operating characteristic (ROC) curves and area-under-the-curve were derived for each ranking using varying relevance score cutoffs.
RESULTS: Receiver operating characteristic curve areas were acceptably high for each broad concept (range 0.74 to 0.98). At relevance scores that optimized sensitivity and specificity, 78% to 100% of highly relevant documents were identified. The best results were obtained with the application of 63 to 1437 subconcepts for a given broad concept. The search time was fast.
CONCLUSIONS: The KM tool capably and automatically locates the detailed coverage of broad concepts across medical school documents in real time. Use of KM or similar tools may prove useful for other medical schools to identify broad concepts in their curricula.

Entities:  

Mesh:

Year:  2005        PMID: 16191143      PMCID: PMC1490241          DOI: 10.1111/j.1525-1497.2005.0203.x

Source DB:  PubMed          Journal:  J Gen Intern Med        ISSN: 0884-8734            Impact factor:   5.128


  8 in total

1.  "Understanding" medical school curriculum content using KnowledgeMap.

Authors:  Joshua C Denny; Jeffrey D Smithers; Randolph A Miller; Anderson Spickard
Journal:  J Am Med Inform Assoc       Date:  2003-03-28       Impact factor: 4.497

2.  The role of domain knowledge in automating medical text report classification.

Authors:  Adam B Wilcox; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2003-03-28       Impact factor: 4.497

Review 3.  Tufts Health Sciences Database: lessons, issues, and opportunities.

Authors:  Mary Y Lee; Susan A Albright; Tarik Alkasab; David A Damassa; Paul J Wang; Elizabeth K Eaton
Journal:  Acad Med       Date:  2003-03       Impact factor: 6.893

4.  Creating a virtual community of learning predicated on medical student learning styles.

Authors:  Julie McGowan; Matthew Abrams; Mark Frank; Michael Bangert
Journal:  AMIA Annu Symp Proc       Date:  2003

5.  The KnowledgeMap project: development of a concept-based medical school curriculum database.

Authors:  Joshua C Denny; Plomarz R Irani; Firas H Wehbe; Jeffrey D Smithers; Anderson Spickard
Journal:  AMIA Annu Symp Proc       Date:  2003

6.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

7.  Rapid measurement of B-type natriuretic peptide in the emergency diagnosis of heart failure.

Authors:  Alan S Maisel; Padma Krishnaswamy; Richard M Nowak; James McCord; Judd E Hollander; Philippe Duc; Torbjørn Omland; Alan B Storrow; William T Abraham; Alan H B Wu; Paul Clopton; Philippe G Steg; Arne Westheim; Catherine Wold Knudsen; Alberto Perez; Radmila Kazanegra; Howard C Herrmann; Peter A McCullough
Journal:  N Engl J Med       Date:  2002-07-18       Impact factor: 91.245

8.  Effect of verification bias on screening for prostate cancer by measurement of prostate-specific antigen.

Authors:  Rinaa S Punglia; Anthony V D'Amico; William J Catalona; Kimberly A Roehl; Karen M Kuntz
Journal:  N Engl J Med       Date:  2003-07-24       Impact factor: 91.245

  8 in total
  14 in total

1.  Tracking medical students' clinical experiences using natural language processing.

Authors:  Joshua C Denny; Lisa Bastarache; Elizabeth Ann Sastre; Anderson Spickard
Journal:  J Biomed Inform       Date:  2009-02-21       Impact factor: 6.317

2.  Comparing content coverage in medical curriculum to trainee-authored clinical notes.

Authors:  Joshua C Denny; Peter Speltz; Raquel Maddox; Glenn Stein; Hua Xu; Anderson Spickard
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

3.  Data from clinical notes: a perspective on the tension between structure and flexible documentation.

Authors:  S Trent Rosenbloom; Joshua C Denny; Hua Xu; Nancy Lorenzi; William W Stead; Kevin B Johnson
Journal:  J Am Med Inform Assoc       Date:  2011-01-12       Impact factor: 4.497

4.  Automated Assessment of Medical Students' Clinical Exposures according to AAMC Geriatric Competencies.

Authors:  Yukun Chen; Jesse Wrenn; Hua Xu; Anderson Spickard; Ralf Habermann; James Powers; Joshua C Denny
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

5.  The effect of reducing maximum shift lengths to 16 hours on internal medicine interns' educational opportunities.

Authors:  Cecelia N Theobald; Daniel G Stover; Neesha N Choma; Jacob Hathaway; Jennifer K Green; Neeraja B Peterson; Kelly C Sponsler; Eduard E Vasilevskis; Sunil Kripalani; John Sergent; Nancy J Brown; Joshua C Denny
Journal:  Acad Med       Date:  2013-04       Impact factor: 6.893

6.  Portability of an algorithm to identify rheumatoid arthritis in electronic health records.

Authors:  Robert J Carroll; Will K Thompson; Anne E Eyler; Arthur M Mandelin; Tianxi Cai; Raquel M Zink; Jennifer A Pacheco; Chad S Boomershine; Thomas A Lasko; Hua Xu; Elizabeth W Karlson; Raul G Perez; Vivian S Gainer; Shawn N Murphy; Eric M Ruderman; Richard M Pope; Robert M Plenge; Abel Ngo Kho; Katherine P Liao; Joshua C Denny
Journal:  J Am Med Inform Assoc       Date:  2012-02-28       Impact factor: 4.497

7.  A comparison of rule-based and machine learning approaches for classifying patient portal messages.

Authors:  Robert M Cronin; Daniel Fabbri; Joshua C Denny; S Trent Rosenbloom; Gretchen Purcell Jackson
Journal:  Int J Med Inform       Date:  2017-06-23       Impact factor: 4.046

8.  Extracting and integrating data from entire electronic health records for detecting colorectal cancer cases.

Authors:  Hua Xu; Zhenming Fu; Anushi Shah; Yukun Chen; Neeraja B Peterson; Qingxia Chen; Subramani Mani; Mia A Levy; Qi Dai; Josh C Denny
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

9.  Naïve Electronic Health Record phenotype identification for Rheumatoid arthritis.

Authors:  Robert J Carroll; Anne E Eyler; Joshua C Denny
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

10.  A student authored online medical education textbook: editing patterns and content evaluation of a medical student wiki.

Authors:  C L Thompson; Wade L Schulz; Adam Terrence
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22
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