Literature DB >> 16187128

Reconstitution and alignment by a magnetic field of a beta-barrel membrane protein in bicelles.

Mohamed N Triba1, Manuela Zoonens, Jean-Luc Popot, Philippe F Devaux, Dror E Warschawski.   

Abstract

A protocol is described for the reconstitution of a transmembrane beta-barrel protein domain, tOmpA, into lipid bicelles. tOmpA is the largest protein to be reconstituted in bicelles to date. Its insertion does not prevent bicelles from orienting with their plane either parallel or perpendicular to the magnetic field, depending on the absence or presence of paramagnetic ions. In the latter case, tOmpA is shown to align with the axis of the beta-barrel parallel to the magnetic field, i.e. perpendicular to the plane of the bilayer, an orientation conforming to that in natural membranes and favourable to structural studies by solid-state NMR. Reconstitution into bicelles may offer an interesting approach for structural studies of membrane proteins in a medium resembling a biological membrane, using either NMR or other biophysical techniques. Our data suggest that alignment in the magnetic field of membrane proteins included into bicelles may be facilitated if the protein is folded as a beta-barrel structure.

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Year:  2005        PMID: 16187128     DOI: 10.1007/s00249-005-0014-x

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  30 in total

1.  Structure of outer membrane protein A transmembrane domain by NMR spectroscopy.

Authors:  A Arora; F Abildgaard; J H Bushweller; L K Tamm
Journal:  Nat Struct Biol       Date:  2001-04

2.  NMR methods for studying the structure and dynamics of oncogenic and antihistaminic peptides in biomembranes.

Authors:  Christina Sizun; Fabien Aussenac; Axelle Grelard; Erick J Dufourc
Journal:  Magn Reson Chem       Date:  2004-02       Impact factor: 2.447

3.  NMR structure determination of a membrane protein with two transmembrane helices in micelles: MerF of the bacterial mercury detoxification system.

Authors:  Stanley C Howell; Michael F Mesleh; Stanley J Opella
Journal:  Biochemistry       Date:  2005-04-05       Impact factor: 3.162

4.  Can PISEMA experiments be used to extract structural parameters for mobile beta-barrels?

Authors:  Dustin W Bleile; Walter R P Scott; Suzana K Straus
Journal:  J Biomol NMR       Date:  2005-06       Impact factor: 2.835

5.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

6.  Residual backbone and side-chain 13C and 15N resonance assignments of the intrinsic transmembrane light-harvesting 2 protein complex by solid-state Magic Angle Spinning NMR spectroscopy.

Authors:  A J van Gammeren; F B Hulsbergen; J G Hollander; H J M de Groot
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

7.  Towards high-resolution solid-state NMR on large uniformly 15N- and [13C,15N]-labeled membrane proteins in oriented lipid bilayers.

Authors:  Thomas Vosegaard; Niels Chr Nielsen
Journal:  J Biomol NMR       Date:  2002-03       Impact factor: 2.835

8.  Bicelle-based liquid crystals for NMR-measurement of dipolar couplings at acidic and basic pH values.

Authors:  M Ottiger; A Bax
Journal:  J Biomol NMR       Date:  1999-02       Impact factor: 2.835

9.  Structural and orientational constraints of bacteriorhodopsin in purple membranes determined by oriented-sample solid-state NMR spectroscopy.

Authors:  Miya Kamihira; Thomas Vosegaard; A James Mason; Suzana K Straus; Niels Chr Nielsen; Anthony Watts
Journal:  J Struct Biol       Date:  2005-01       Impact factor: 2.867

10.  Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR.

Authors:  C R Sanders; J P Schwonek
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

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  12 in total

1.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

Authors:  Hak Jun Kim; Stanley C Howell; Wade D Van Horn; Young Ho Jeon; Charles R Sanders
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-11-01       Impact factor: 9.795

2.  A Practical Implicit Membrane Potential for NMR Structure Calculations of Membrane Proteins.

Authors:  Ye Tian; Charles D Schwieters; Stanley J Opella; Francesca M Marassi
Journal:  Biophys J       Date:  2015-08-04       Impact factor: 4.033

Review 3.  Solution NMR of membrane proteins in bilayer mimics: small is beautiful, but sometimes bigger is better.

Authors:  Sébastien F Poget; Mark E Girvin
Journal:  Biochim Biophys Acta       Date:  2007-09-20

4.  Isotropic bicelles stabilize the functional form of a small multidrug-resistance pump for NMR structural studies.

Authors:  Sébastien F Poget; Sean M Cahill; Mark E Girvin
Journal:  J Am Chem Soc       Date:  2007-02-07       Impact factor: 15.419

5.  Orientation of the Escherichia coli outer membrane protein OmpX in phospholipid bilayer membranes determined by solid-State NMR.

Authors:  Radhakrishnan Mahalakshmi; Francesca M Marassi
Journal:  Biochemistry       Date:  2008-06-24       Impact factor: 3.162

6.  Effects of lipid chain length and unsaturation on bicelles stability. A phosphorus NMR study.

Authors:  Mohamed N Triba; Philippe F Devaux; Dror E Warschawski
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

7.  Supramolecular Organization of Apolipoprotein-A-I-Derived Peptides within Disc-like Arrangements.

Authors:  Evgeniy S Salnikov; G M Anantharamaiah; Burkhard Bechinger
Journal:  Biophys J       Date:  2018-07-11       Impact factor: 4.033

8.  Expression, refolding, and initial structural characterization of the Y. pestis Ail outer membrane protein in lipids.

Authors:  Leigh A Plesniak; Radhakrishnan Mahalakshmi; Candace Rypien; Yuan Yang; Jasmina Racic; Francesca M Marassi
Journal:  Biochim Biophys Acta       Date:  2010-09-29

9.  NMR structural studies of the bacterial outer membrane protein OmpX in oriented lipid bilayer membranes.

Authors:  Radhakrishnan Mahalakshmi; Carla M Franzin; Jungyuen Choi; Francesca M Marassi
Journal:  Biochim Biophys Acta       Date:  2007-08-24

Review 10.  The magic of bicelles lights up membrane protein structure.

Authors:  Ulrich H N Dürr; Melissa Gildenberg; Ayyalusamy Ramamoorthy
Journal:  Chem Rev       Date:  2012-08-24       Impact factor: 60.622

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