Literature DB >> 16186903

The effect of cooperative hydrogen bonding on the OH stretching-band shift for water clusters studied by matrix-isolation infrared spectroscopy and density functional theory.

Keiichi Ohno1, Mari Okimura, Nobuyuki Akai, Yukiteru Katsumoto.   

Abstract

Infrared spectra of the water clusters have been measured in the N2 + O2 matrix. The aggregation process of water in the matrix has been monitored by annealing the deposited samples up to 40 K and UV irradiation. The monomer, dimer, cyclic trimer and cyclic pentamer are found as water clusters in the matrix. For the hexamer, several structures such as chair, cage, prism, bag 1 and/or book 1 are likely to exist. By UV irradiation, the cyclic pentamer is predominantly formed from the monomer and dimer. On the other hand, by annealing the deposited sample, several hexamers are formed. The theoretical calculation for water clusters has revealed that the formation of one hydrogen bonding in a hydrogen-bonded chain cooperatively enhances or diminishes the strength of another hydrogen bond. Both proton donor (D) and acceptor (A) participating in a hydrogen-bonding pair DA are capable of forming hydrogen bonding with the other water molecules; D can additionally accept two protons and donate one proton, and A can additionally donate two protons and accept one proton. We have proposed the classification of hydrogen-bonding patterns considering the cooperativity, denoting as d'a'DAd''a'', where d and a are integers indicating the number of proton donors and acceptors to D (the single prime) and A (the double prime), respectively. Then, a magnitude given by MOH = -d' + a' + d'' - a'' has been introduced, which is very useful for connecting the hydrogen-bonding patterns to their OH wavenumbers. As a result, it is revealed that the OH stretching bands of water clusters are characterized by eight indicators (free and MOH = -2, -1, 0, 1, 2, 3 and 4). The classification proposed here is applicable to the OH band analysis for the hydrogen-bonded water and alcohols in a condensed phase.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16186903     DOI: 10.1039/b506641g

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  11 in total

1.  Prediction of accurate anharmonic experimental vibrational frequencies for water clusters, (H2O)n, n=2-5.

Authors:  Meghan E Dunn; Timothy M Evans; Karl N Kirschner; George C Shields
Journal:  J Phys Chem A       Date:  2006-01-12       Impact factor: 2.781

2.  Effect of hydrogen bond cooperativity on the behavior of water.

Authors:  Kevin Stokely; Marco G Mazza; H Eugene Stanley; Giancarlo Franzese
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-08       Impact factor: 11.205

3.  Origin of hydrophobicity and enhanced water hydrogen bond strength near purely hydrophobic solutes.

Authors:  Joze Grdadolnik; Franci Merzel; Franc Avbelj
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

4.  Cooperative effect of water molecules in the self-catalyzed neutral hydrolysis of isocyanic acid: a comprehensive theoretical study.

Authors:  Xi-Guang Wei; Xiao-Ming Sun; Xiao-Peng Wu; Song Geng; Yi Ren; Ning-Bew Wong; Wai-Kee Li
Journal:  J Mol Model       Date:  2010-12-14       Impact factor: 1.810

5.  Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute HOD in liquid D2O.

Authors:  B Auer; R Kumar; J R Schmidt; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-18       Impact factor: 11.205

6.  Shortwave-infrared Raman spectroscopic classification of water fractions in articular cartilage ex vivo.

Authors:  Mustafa Unal; Ozan Akkus
Journal:  J Biomed Opt       Date:  2018-01       Impact factor: 3.170

7.  Quantum Calculations On Hydrogen Bonds In Certain Water Clusters Show Cooperative Effects.

Authors:  Vasiliy S Znamenskiy; Michael E Green
Journal:  J Chem Theory Comput       Date:  2007-01       Impact factor: 6.006

8.  Temperature-Induced Change of Water Structure in Aqueous Solutions of Some Kosmotropic and Chaotropic Salts.

Authors:  Ferenc Kovács; Hui Yan; Heng Li; Sándor Kunsági-Máté
Journal:  Int J Mol Sci       Date:  2021-11-29       Impact factor: 5.923

9.  Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif.

Authors:  Chakka Kiran Kumar; Shankar Deval Sathiyashivan; Dhanraj T Masram; K V Jovan Jose; Malaichamy Sathiyendiran
Journal:  RSC Adv       Date:  2019-01-04       Impact factor: 4.036

10.  Structural Assessment of Hydrogen Bonds on Methylpentynol-Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory.

Authors:  Marzieh Hashemi; Avat Arman Taherpour
Journal:  ACS Omega       Date:  2020-03-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.