Literature DB >> 16185910

Integrating segmentation methods from the Insight Toolkit into a visualization application.

Ken Martin1, Luis Ibáñez, Lisa Avila, Sébastien Barré, Jon H Kaspersen.   

Abstract

The Insight Toolkit (ITK) initiative from the National Library of Medicine has provided a suite of state-of-the-art segmentation and registration algorithms ideally suited to volume visualization and analysis. A volume visualization application that effectively utilizes these algorithms provides many benefits: it allows access to ITK functionality for non-programmers, it creates a vehicle for sharing and comparing segmentation techniques, and it serves as a visual debugger for algorithm developers. This paper describes the integration of image processing functionalities provided by the ITK into VolView, a visualization application for high performance volume rendering. A free version of this visualization application is publicly available and is available in the online version of this paper. The process for developing ITK plugins for VolView according to the publicly available API is described in detail, and an application of ITK VolView plugins to the segmentation of Abdominal Aortic Aneurysms (AAAs) is presented. The source code of the ITK plugins is also publicly available and it is included in the online version.

Entities:  

Mesh:

Year:  2005        PMID: 16185910     DOI: 10.1016/j.media.2005.04.009

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  6 in total

1.  Sub-millimeter isotropic MRI for segmentation of subcortical brain regions and brain visualization.

Authors:  Ying Wu; Ann B Ragin; Hongyan Du; Shawn Sidharthan; Eugene E Dunkle; Ioannis Koktzoglou; Robert R Edelman
Journal:  J Magn Reson Imaging       Date:  2010-04       Impact factor: 4.813

2.  "RADIOTRANSCRIPTOMICS": A synergy of imaging and transcriptomics in clinical assessment.

Authors:  Amal Katrib; William Hsu; Alex Bui; Yi Xing
Journal:  Quant Biol       Date:  2016-03-04

3.  Lung water assessment by lung ultrasonography in intensive care: a pilot study.

Authors:  Giacomo Baldi; Luna Gargani; Antonio Abramo; Luigia D'Errico; Davide Caramella; Eugenio Picano; Francesco Giunta; Francesco Forfori
Journal:  Intensive Care Med       Date:  2012-09-28       Impact factor: 17.440

4.  Why do commercial CT scanners still employ traditional, filtered back-projection for image reconstruction?

Authors:  Xiaochuan Pan; Emil Y Sidky; Michael Vannier
Journal:  Inverse Probl       Date:  2009-01-01       Impact factor: 2.407

5.  Systematic Parameterization, Storage, and Representation of Volumetric DICOM Data.

Authors:  Felix Fischer; M Alper Selver; Sinem Gezer; Oğuz Dicle; Walter Hillen
Journal:  J Med Biol Eng       Date:  2015-11-18       Impact factor: 1.553

6.  Automatic Segmentation of Ultrasound Tomography Image.

Authors:  Shibin Wu; Shaode Yu; Ling Zhuang; Xinhua Wei; Mark Sak; Neb Duric; Jiani Hu; Yaoqin Xie
Journal:  Biomed Res Int       Date:  2017-09-10       Impact factor: 3.411

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.