Literature DB >> 16185062

Novel use of an osmolyte to dissect multiple thermodynamic linkages in a chemokine ligand-receptor system.

Lavanya Rajagopalan1, Jörg Rösgen, David Wayne Bolen, Krishna Rajarathnam.   

Abstract

We have used trimethylamine N-oxide (TMAO), a protecting osmolyte, to dissect the complex thermodynamic linkages involved in the interaction between the chemokine interleukin-8 (IL-8) and the N-domain of its receptor CXCR1. Our results show that TMAO induces folding in the CXCR1 receptor N-domain and that the N-domain upon folding binds ligand with higher affinity. This represents, to our knowledge, the smallest domain that has been shown to be folded in osmolyte. Using the phase diagram method to analyze this thermodynamic relationship graphically, we also observe that TMAO favors ligand dimerization and that the dimeric ligand binds the receptor domain with lower affinity. We have thus been able to dissect coupling among three distinct processes, receptor domain folding, ligand dimerization, and ligand-receptor domain binding in this chemokine-receptor system. We also observe that the affinity of the related chemokine, melanoma growth stimulatory activity (MGSA), increases concurrent with N-domain folding similar to IL-8 but shows more profound differences on ligand dimerization. These studies establish a novel and innovative use of osmolytes to dissect linkages among different processes and exploit the phase diagram as a tool to graphically represent and dissect complex thermodynamic relationships in biological systems. On the basis of our observations and earlier work, we discuss the relevance of ligand dimerization in chemokine regulation.

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Year:  2005        PMID: 16185062     DOI: 10.1021/bi051219z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

Review 1.  Structural basis of chemokine receptor function--a model for binding affinity and ligand selectivity.

Authors:  Lavanya Rajagopalan; Krishna Rajarathnam
Journal:  Biosci Rep       Date:  2006-10       Impact factor: 3.840

2.  Protein phase diagrams II: nonideal behavior of biochemical reactions in the presence of osmolytes.

Authors:  Allan Chris M Ferreon; Josephine C Ferreon; D Wayne Bolen; Jörg Rösgen
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

3.  Thermodynamic characterization of interleukin-8 monomer binding to CXCR1 receptor N-terminal domain.

Authors:  Harshica Fernando; Gregg T Nagle; Krishna Rajarathnam
Journal:  FEBS J       Date:  2007-01       Impact factor: 5.542

4.  Thermodynamic analysis of ligands at cholecystokinin CCK2 receptors in rat cerebral cortex.

Authors:  E A Harper; S P Roberts; S B Kalindjian
Journal:  Br J Pharmacol       Date:  2007-06-25       Impact factor: 8.739

5.  Forced folding of a disordered protein accesses an alternative folding landscape.

Authors:  Mahdi Muhammad Moosa; Allan Chris M Ferreon; Ashok A Deniz
Journal:  Chemphyschem       Date:  2014-10-24       Impact factor: 3.102

6.  Probing receptor binding activity of interleukin-8 dimer using a disulfide trap.

Authors:  Krishna Rajarathnam; Gregory N Prado; Harshica Fernando; Ian Clark-Lewis; Javier Navarro
Journal:  Biochemistry       Date:  2006-06-27       Impact factor: 3.162

7.  Restoration of structural stability and ligand binding after removal of the conserved disulfide bond in tear lipocalin.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  Biochem Biophys Res Commun       Date:  2014-09-16       Impact factor: 3.575

8.  Dynamics-Derived Insights into Complex Formation between the CXCL8 Monomer and CXCR1 N-Terminal Domain: An NMR Study.

Authors:  Prem Raj B Joseph; Leo Spyracopoulos; Krishna Rajarathnam
Journal:  Molecules       Date:  2018-10-31       Impact factor: 4.411

  8 in total

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