Literature DB >> 16177136

Spurious splicing within the XIAP 5' UTR occurs in the Rluc/Fluc but not the betagal/CAT bicistronic reporter system.

Martin Holcik1, Tyson Graber, Stephen M Lewis, Charles A Lefebvre, Eric Lacasse, Stephen Baird.   

Abstract

X-chromosome-linked inhibitor of apoptosis, XIAP, has been shown to contain a strong internal ribosome entry site (IRES) within its 5' untranslated region (UTR) that promotes translation of XIAP mRNA under conditions of cellular stress. This claim came under scrutiny in a recent report demonstrating that the XIAP 5' UTR undergoes splicing when inserted between the two reporter cistrons of the dual luciferase plasmid Rluc/Fluc. In this paper, we demonstrate that the splicing within the XIAP 5' UTR specifically occurs only in the context of mRNA produced from the Rluc/Fluc but not the pbetagal/CAT bicistronic reporter plasmid.

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Year:  2005        PMID: 16177136      PMCID: PMC1370845          DOI: 10.1261/rna.2158605

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  16 in total

1.  A conserved family of cellular genes related to the baculovirus iap gene and encoding apoptosis inhibitors.

Authors:  C S Duckett; V E Nava; R W Gedrich; R J Clem; J L Van Dongen; M C Gilfillan; H Shiels; J M Hardwick; C B Thompson
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

2.  The utrophin A 5'-untranslated region confers internal ribosome entry site-mediated translational control during regeneration of skeletal muscle fibers.

Authors:  Pedro Miura; Jennifer Thompson; Joe V Chakkalakal; Martin Holcik; Bernard J Jasmin
Journal:  J Biol Chem       Date:  2005-08-01       Impact factor: 5.157

3.  The internal ribosome entry site-mediated translation of antiapoptotic protein XIAP is modulated by the heterogeneous nuclear ribonucleoproteins C1 and C2.

Authors:  Martin Holcík; Bruce W Gordon; Robert G Korneluk
Journal:  Mol Cell Biol       Date:  2003-01       Impact factor: 4.272

4.  Use of Escherichiu coli (E. coli) lacZ (β-Galactosidase) as a Reporter Gene.

Authors:  G R Macgregor; G P Nolan; S Fiering; M Roederer; L A Herzenberg
Journal:  Methods Mol Biol       Date:  1991

5.  Genomic organization of the X-linked inhibitor of apoptosis and identification of a novel testis-specific transcript.

Authors:  M Lagacé; J Y Xuan; S S Young; C McRoberts; J Maier; E Rajcan-Separovic; R G Korneluk
Journal:  Genomics       Date:  2001-10       Impact factor: 5.736

6.  Composition and arrangement of genes define the strength of IRES-driven translation in bicistronic mRNAs.

Authors:  M Hennecke; M Kwissa; K Metzger; A Oumard; A Kröger; R Schirmbeck; J Reimann; H Hauser
Journal:  Nucleic Acids Res       Date:  2001-08-15       Impact factor: 16.971

7.  Genomic characterization of the mouse inhibitor of apoptosis protein 1 and 2 genes.

Authors:  P Liston; C Lefebvre; W G Fong; J Y Xuan; R G Korneluk
Journal:  Genomics       Date:  1997-12-15       Impact factor: 5.736

8.  Translation of cellular inhibitor of apoptosis protein 1 (c-IAP1) mRNA is IRES mediated and regulated during cell stress.

Authors:  Marc E Van Eden; Marshall P Byrd; Kyle W Sherrill; Richard E Lloyd
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

9.  Translational induction of the inhibitor of apoptosis protein HIAP2 during endoplasmic reticulum stress attenuates cell death and is mediated via an inducible internal ribosome entry site element.

Authors:  Dinesh Warnakulasuriyarachchi; Sonia Cerquozzi; Herman H Cheung; Martin Holcík
Journal:  J Biol Chem       Date:  2004-02-11       Impact factor: 5.157

10.  Cloning and characterization of the rat homologues of the Inhibitor of Apoptosis protein 1, 2, and 3 genes.

Authors:  Martin Holcik; Charles A Lefebvre; Keiko Hicks; Robert G Korneluk
Journal:  BMC Genomics       Date:  2002-02-11       Impact factor: 3.969

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  38 in total

1.  Two independent mechanisms promote expression of an N-terminal truncated USP18 isoform with higher DeISGylation activity in the nucleus.

Authors:  Christoph Burkart; Jun-Bao Fan; Dong-Er Zhang
Journal:  J Biol Chem       Date:  2011-12-14       Impact factor: 5.157

2.  Stat1 stimulates cap-independent mRNA translation to inhibit cell proliferation and promote survival in response to antitumor drugs.

Authors:  Shuo Wang; Christos Patsis; Antonis E Koromilas
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

3.  Alphavirus replicon approach to promoterless analysis of IRES elements.

Authors:  K I Kamrud; M Custer; J M Dudek; G Owens; K D Alterson; J S Lee; J L Groebner; J F Smith
Journal:  Virology       Date:  2006-12-06       Impact factor: 3.616

Review 4.  Searching for IRES.

Authors:  Stephen D Baird; Marcel Turcotte; Robert G Korneluk; Martin Holcik
Journal:  RNA       Date:  2006-09-06       Impact factor: 4.942

5.  Splicing mediates the activity of four putative cellular internal ribosome entry sites.

Authors:  Brian T Baranick; Nathan A Lemp; Jill Nagashima; Kei Hiraoka; Noriyuki Kasahara; Christopher R Logg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-07       Impact factor: 11.205

6.  Potent activation of FGF-2 IRES-dependent mechanism of translation during brain development.

Authors:  Sylvie Audigier; Janique Guiramand; Leonel Prado-Lourenco; Caroline Conte; Irma Gabriela Gonzalez-Herrera; Catherine Cohen-Solal; Max Récasens; Anne-Catherine Prats
Journal:  RNA       Date:  2008-08-01       Impact factor: 4.942

7.  Distinct 5' UTRs regulate XIAP expression under normal growth conditions and during cellular stress.

Authors:  Alura Riley; Lindsay E Jordan; Martin Holcik
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

8.  Differential contribution of the m7G-cap to the 5' end-dependent translation initiation of mammalian mRNAs.

Authors:  Dmitri E Andreev; Sergey E Dmitriev; Ilya M Terenin; Vladimir S Prassolov; William C Merrick; Ivan N Shatsky
Journal:  Nucleic Acids Res       Date:  2009-08-20       Impact factor: 16.971

9.  Stabilization of XIAP mRNA through the RNA binding protein HuR regulated by cellular polyamines.

Authors:  Xian Zhang; Tongtong Zou; Jaladanki N Rao; Lan Liu; Lan Xiao; Peng-Yuan Wang; Yu-Hong Cui; Myriam Gorospe; Jian-Ying Wang
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

10.  An internal ribosomal entry site mediates redox-sensitive translation of Nrf2.

Authors:  Wenge Li; Nehal Thakor; Eugenia Y Xu; Ying Huang; Chi Chen; Rong Yu; Martin Holcik; Ah-Ng Kong
Journal:  Nucleic Acids Res       Date:  2009-11-24       Impact factor: 16.971

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