Literature DB >> 16170824

Automated imaging of extended tissue volumes using confocal microscopy.

Gregory B Sands1, Dane A Gerneke, Darren A Hooks, Colin R Green, Bruce H Smaill, Ian J Legrice.   

Abstract

Confocal microscopy enables constitutive elements of cells and tissues to be viewed at high resolution and reconstructed in three dimensions, but is constrained by the limited extent of the volumes that can be imaged. We have developed an automated technique that enables serial confocal images to be acquired over large tissue areas and volumes. The computer-controlled system, which integrates a confocal microscope and an ultramill using a high-precision translation stage, inherently preserves specimen registration, and the user control interface enables flexible specification of imaging protocols over a wide range of scales and resolutions. With this system it is possible to reconstruct specified morphological features in three dimensions and locate them accurately throughout a tissue sample. We have successfully imaged various samples at 1-mum voxel resolution on volumes up to 4 mm3 and on areas up to 75 mm2. Used in conjunction with appropriate embedding media and immuno-histochemical probes, the techniques described in this paper make it possible to routinely map the distributions of key intracellular structures over much larger tissue domains than has been easily achievable in the past. (c) 2005 Wiley-Liss, Inc.

Mesh:

Year:  2005        PMID: 16170824     DOI: 10.1002/jemt.20200

Source DB:  PubMed          Journal:  Microsc Res Tech        ISSN: 1059-910X            Impact factor:   2.769


  46 in total

1.  The presence of two local myocardial sheet populations confirmed by diffusion tensor MRI and histological validation.

Authors:  Geoffrey L Kung; Tom C Nguyen; Aki Itoh; Stefan Skare; Neil B Ingels; D Craig Miller; Daniel B Ennis
Journal:  J Magn Reson Imaging       Date:  2011-09-19       Impact factor: 4.813

2.  Visualization and quantification of whole rat heart laminar structure using high-spatial resolution contrast-enhanced MRI.

Authors:  Stephen H Gilbert; David Benoist; Alan P Benson; Ed White; Steven F Tanner; Arun V Holden; Halina Dobrzynski; Olivier Bernus; Aleksandra Radjenovic
Journal:  Am J Physiol Heart Circ Physiol       Date:  2011-10-21       Impact factor: 4.733

3.  Construction and validation of anisotropic and orthotropic ventricular geometries for quantitative predictive cardiac electrophysiology.

Authors:  Alan P Benson; Olivier Bernus; Hans Dierckx; Stephen H Gilbert; John P Greenwood; Arun V Holden; Kevin Mohee; Sven Plein; Aleksandra Radjenovic; Michael E Ries; Godfrey L Smith; Steven Sourbron; Richard D Walton
Journal:  Interface Focus       Date:  2010-12-03       Impact factor: 3.906

Review 4.  Theoretical models for coronary vascular biomechanics: progress & challenges.

Authors:  Sarah L Waters; Jordi Alastruey; Daniel A Beard; Peter H M Bovendeerd; Peter F Davies; Girija Jayaraman; Oliver E Jensen; Jack Lee; Kim H Parker; Aleksander S Popel; Timothy W Secomb; Maria Siebes; Spencer J Sherwin; Rebecca J Shipley; Nicolas P Smith; Frans N van de Vosse
Journal:  Prog Biophys Mol Biol       Date:  2010-10-30       Impact factor: 3.667

5.  Numerical metrics for automated quantification of interstitial cell of Cajal network structural properties.

Authors:  Jerry Gao; Peng Du; Greg O'Grady; Rosalind Archer; Gianrico Farrugia; Simon J Gibbons; Leo K Cheng
Journal:  J R Soc Interface       Date:  2013-06-26       Impact factor: 4.118

6.  Structure tensor analysis of serial optical coherence scanner images for mapping fiber orientations and tractography in the brain.

Authors:  Hui Wang; Christophe Lenglet; Taner Akkin
Journal:  J Biomed Opt       Date:  2015-03       Impact factor: 3.170

7.  Serial optical coherence scanner for large-scale brain imaging at microscopic resolution.

Authors:  Hui Wang; Junfeng Zhu; Taner Akkin
Journal:  Neuroimage       Date:  2013-10-04       Impact factor: 6.556

8.  Episcopic 3D Imaging Methods: Tools for Researching Gene Function.

Authors:  Wolfgang J Weninger; Stefan H Geyer
Journal:  Curr Genomics       Date:  2008-06       Impact factor: 2.236

9.  Showing their true colors: a practical approach to volume rendering from serial sections.

Authors:  Stephan Handschuh; Thomas Schwaha; Brian D Metscher
Journal:  BMC Dev Biol       Date:  2010-04-21       Impact factor: 1.978

10.  Trabeculae carneae as models of the ventricular walls: implications for the delivery of oxygen.

Authors:  Soyeon Goo; Purva Joshi; Greg Sands; Dane Gerneke; Andrew Taberner; Qaasim Dollie; Ian LeGrice; Denis Loiselle
Journal:  J Gen Physiol       Date:  2009-09-14       Impact factor: 4.086

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