Literature DB >> 16153784

Congruence of evidence for a Methanopyrus-proximal root of life based on transfer RNA and aminoacyl-tRNA synthetase genes.

Hong Xue1, Siu-Kin Ng, Ka-Lok Tong, J Tze-Fei Wong.   

Abstract

Among 60 organisms, the intraspecies genetic distances between tRNAs cognate for different amino acids, between the initiator and elongator tRNAs for Met, and between potentially paralogous pairs of aminoacyl-tRNA synthetases are found to be at a minimum within the Methanopyrus kandleri genome. These results indicate an exact congruence between the evidence from tRNA and aminoacyl-tRNA synthetase genes locating the root of life closest to this organism.

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Year:  2005        PMID: 16153784     DOI: 10.1016/j.gene.2005.06.027

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  15 in total

1.  Question 6: coevolution theory of the genetic code: a proven theory.

Authors:  Jeffrey Tze-Fei Wong
Journal:  Orig Life Evol Biosph       Date:  2007-07-05       Impact factor: 1.950

2.  The evolutionary history of the structure of 5S ribosomal RNA.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2009-07-29       Impact factor: 2.395

3.  A tree of cellular life inferred from a genomic census of molecular functions.

Authors:  Kyung Mo Kim; Arshan Nasir; Kyuin Hwang; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2014-08-17       Impact factor: 2.395

4.  The ancient history of the structure of ribonuclease P and the early origins of Archaea.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  BMC Bioinformatics       Date:  2010-03-24       Impact factor: 3.169

5.  Search for primitive Methanopyrus based on genetic distance between Val- and Ile-tRNA synthetases.

Authors:  Zhiliang Yu; Ken Takai; Alexei Slesarev; Hong Xue; J Tze-Fei Wong
Journal:  J Mol Evol       Date:  2009-10-20       Impact factor: 2.395

6.  The proteomic complexity and rise of the primordial ancestor of diversified life.

Authors:  Kyung Mo Kim; Gustavo Caetano-Anollés
Journal:  BMC Evol Biol       Date:  2011-05-25       Impact factor: 3.260

7.  The evolutionary history of protein fold families and proteomes confirms that the archaeal ancestor is more ancient than the ancestors of other superkingdoms.

Authors:  Kyung Mo Kim; Gustavo Caetano-Anollés
Journal:  BMC Evol Biol       Date:  2012-01-27       Impact factor: 3.260

Review 8.  Archaea: the first domain of diversified life.

Authors:  Gustavo Caetano-Anollés; Arshan Nasir; Kaiyue Zhou; Derek Caetano-Anollés; Jay E Mittenthal; Feng-Jie Sun; Kyung Mo Kim
Journal:  Archaea       Date:  2014-06-02       Impact factor: 3.273

9.  Evolutionary patterns in the sequence and structure of transfer RNA: early origins of archaea and viruses.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  PLoS Comput Biol       Date:  2008-03-07       Impact factor: 4.475

10.  Global patterns of protein domain gain and loss in superkingdoms.

Authors:  Arshan Nasir; Kyung Mo Kim; Gustavo Caetano-Anollés
Journal:  PLoS Comput Biol       Date:  2014-01-30       Impact factor: 4.475

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