Literature DB >> 16151249

Genome-wide transcription profiling of the early phase of biofilm formation by Candida albicans.

Luis A Murillo1, George Newport, Chung-Yu Lan, Stefan Habelitz, Jan Dungan, Nina M Agabian.   

Abstract

The ability to adhere to surfaces and develop as a multicellular community is an adaptation used by most microorganisms to survive in changing environments. Biofilm formation proceeds through distinct developmental phases and impacts not only medicine but also industry and evolution. In organisms such as the opportunistic pathogen Candida albicans, the ability to grow as biofilms is also an important mechanism for persistence, facilitating its growth on different tissues and a broad range of abiotic surfaces used in medical devices. The early stage of C. albicans biofilm is characterized by the adhesion of single cells to the substratum, followed by the formation of an intricate network of hyphae and the beginning of a dense structure. Changes in the transcriptome begin within 30 min of contact with the substrate and include expression of genes related to sulfur metabolism, in particular MET3, and the equivalent gene homologues of the Ribi regulon in Saccharomyces cerevisiae. Some of these changes are initiated early and maintained throughout the process; others are restricted to the earliest stages of biofilm formation. We identify here a potential alternative pathway for cysteine metabolism and the biofilm-associated expression of genes involved in glutathione production in C. albicans.

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Year:  2005        PMID: 16151249      PMCID: PMC1214198          DOI: 10.1128/EC.4.9.1562-1573.2005

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  64 in total

1.  Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae.

Authors:  J D Hughes; P W Estep; S Tavazoie; G M Church
Journal:  J Mol Biol       Date:  2000-03-10       Impact factor: 5.469

2.  Repression of ribosome and tRNA synthesis in secretion-defective cells is signaled by a novel branch of the cell integrity pathway.

Authors:  Y Li; R D Moir; I K Sethy-Coraci; J R Warner; I M Willis
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

3.  The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases.

Authors:  M Grynberg; J Topczewski; A Godzik; A Paszewski
Journal:  Microbiology       Date:  2000-10       Impact factor: 2.777

4.  MET15 as a visual selection marker for Candida albicans.

Authors:  J Viaene; P Tiels; M Logghe; S Dewaele; W Martinet; R Contreras
Journal:  Yeast       Date:  2000-09-30       Impact factor: 3.239

Review 5.  Gene regulation during high-frequency switching in Candida albicans.

Authors:  David R Soil
Journal:  Microbiology (Reading)       Date:  1997-02       Impact factor: 2.777

6.  Simple detection method for distinguishing dead and living yeast colonies.

Authors:  J Kucsera; K Yarita; K Takeo
Journal:  J Microbiol Methods       Date:  2000-06       Impact factor: 2.363

7.  Hgt1p, a high affinity glutathione transporter from the yeast Saccharomyces cerevisiae.

Authors:  A Bourbouloux; P Shahi; A Chakladar; S Delrot; A K Bachhawat
Journal:  J Biol Chem       Date:  2000-05-05       Impact factor: 5.157

8.  The MET3 promoter: a new tool for Candida albicans molecular genetics.

Authors:  R S Care; J Trevethick; K M Binley; P E Sudbery
Journal:  Mol Microbiol       Date:  1999-11       Impact factor: 3.501

9.  Matrix polymers of Candida biofilms and their possible role in biofilm resistance to antifungal agents.

Authors:  G S Baillie; L J Douglas
Journal:  J Antimicrob Chemother       Date:  2000-09       Impact factor: 5.790

10.  Cellular localization and metabolic function of n-butylamine-induced amine oxidases in the fungus Aspergillus niger AKU 3302.

Authors:  I Frébort; S Tanaka; K Matsushita; O Adachi
Journal:  Arch Microbiol       Date:  2000 May-Jun       Impact factor: 2.552

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  57 in total

1.  Genetic control of Candida albicans biofilm development.

Authors:  Jonathan S Finkel; Aaron P Mitchell
Journal:  Nat Rev Microbiol       Date:  2010-12-29       Impact factor: 60.633

2.  Opaque cells signal white cells to form biofilms in Candida albicans.

Authors:  Karla J Daniels; Thyagarajan Srikantha; Shawn R Lockhart; Claude Pujol; David R Soll
Journal:  EMBO J       Date:  2006-04-20       Impact factor: 11.598

Review 3.  Candida albicans cell wall proteins.

Authors:  W LaJean Chaffin
Journal:  Microbiol Mol Biol Rev       Date:  2008-09       Impact factor: 11.056

4.  Candida albicans and Staphylococcus aureus form polymicrobial biofilms: effects on antimicrobial resistance.

Authors:  Melphine M Harriott; Mairi C Noverr
Journal:  Antimicrob Agents Chemother       Date:  2009-06-29       Impact factor: 5.191

5.  The role of Mss11 in Candida albicans biofilm formation.

Authors:  Pei-Wen Tsai; Yu-Ting Chen; Cheng-Yao Yang; Hsueh-Fen Chen; Te-Sheng Tan; Tzung-Wei Lin; Wen-Ping Hsieh; Chung-Yu Lan
Journal:  Mol Genet Genomics       Date:  2014-04-22       Impact factor: 3.291

6.  Candida albicans Biofilm Development and Its Genetic Control.

Authors:  Jigar V Desai; Aaron P Mitchell
Journal:  Microbiol Spectr       Date:  2015-06

7.  Social motility in african trypanosomes.

Authors:  Michael Oberholzer; Miguel A Lopez; Bryce T McLelland; Kent L Hill
Journal:  PLoS Pathog       Date:  2010-01-29       Impact factor: 6.823

8.  Real-time PCR expression profiling of genes encoding potential virulence factors in Candida albicans biofilms: identification of model-dependent and -independent gene expression.

Authors:  Heleen Nailis; Sona Kucharíková; Markéta Ricicová; Patrick Van Dijck; Dieter Deforce; Hans Nelis; Tom Coenye
Journal:  BMC Microbiol       Date:  2010-04-16       Impact factor: 3.605

9.  Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey.

Authors:  Verena Seidl; Lifu Song; Erika Lindquist; Sabine Gruber; Alexeji Koptchinskiy; Susanne Zeilinger; Monika Schmoll; Pedro Martínez; Jibin Sun; Igor Grigoriev; Alfredo Herrera-Estrella; Scott E Baker; Christian P Kubicek
Journal:  BMC Genomics       Date:  2009-11-30       Impact factor: 3.969

10.  Global screening of potential Candida albicans biofilm-related transcription factors via network comparison.

Authors:  Yu-Chao Wang; Chung-Yu Lan; Wen-Ping Hsieh; Luis A Murillo; Nina Agabian; Bor-Sen Chen
Journal:  BMC Bioinformatics       Date:  2010-01-26       Impact factor: 3.169

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