Literature DB >> 16141520

D-amino acid in elderly tissues.

Noriko Fujii1.   

Abstract

All living organisms on earth are composed of L-amino acids and D-sugars. Therefore the presence and function of D-amino acids in living organisms have not been studied. Recently, however, D-aspartic acid (D-Asp) which is a D-amino acid, has been detected in various proteins from human tissue samples such as eye lens, brain, skin, bone, teeth, aorta from elderly individuals. It has been explained that the presence of D-Asp is the result of racemization of Asp residues in the protein during the life span, inasmuch as the proteins in these tissues are metabolically inert. The Asp-151 and Asp-58 residues in alpha A-crystallin from elderly human lens are especially stereochemically labile and the D/L ratios of these residues were greater than 1.0. A D/L ratio greater than 1.0 is not defined as racemization, but as the inversion of configuration. This was the first observation that inversion occurred in the configuration of amino acids in vivo during the natural aging process. In this review, we summarize the D-Asp in the various tissues reported by many researchers and describe the mechanism of D-Asp formation in protein. We suggest that a chiral reaction field exists in the native higher order structure of protein which induces the inversion of L-Asp to D-Asp residue.

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Year:  2005        PMID: 16141520     DOI: 10.1248/bpb.28.1585

Source DB:  PubMed          Journal:  Biol Pharm Bull        ISSN: 0918-6158            Impact factor:   2.233


  14 in total

1.  MAPping the chiral inversion and structural transformation of a metal-tripeptide complex having ni-superoxide dismutase activity.

Authors:  Mary E Krause; Amanda M Glass; Timothy A Jackson; Jennifer S Laurence
Journal:  Inorg Chem       Date:  2011-01-31       Impact factor: 5.165

2.  Differences in α-Crystallin isomerization reveal the activity of protein isoaspartyl methyltransferase (PIMT) in the nucleus and cortex of human lenses.

Authors:  Yana A Lyon; Georgette M Sabbah; Ryan R Julian
Journal:  Exp Eye Res       Date:  2018-03-20       Impact factor: 3.467

Review 3.  Application and microbial preparation of D-valine.

Authors:  Ming Chen; Chao Shi; Jing Zhao; Ziqing Gao; Chunzhi Zhang
Journal:  World J Microbiol Biotechnol       Date:  2016-08-26       Impact factor: 3.312

4.  Identification of D-Amino Acids in Light Exposed mAb Formulations.

Authors:  Rupesh Bommana; Natalia Subelzu; Olivier Mozziconacci; Alavattam Sreedhara; Christian Schöneich
Journal:  Pharm Res       Date:  2018-10-17       Impact factor: 4.200

5.  Investigating d-lysine stereochemistry for epigenetic methylation, demethylation and recognition.

Authors:  Roman Belle; Abbas H K Al Temimi; Kiran Kumar; Bas J G E Pieters; Anthony Tumber; James E Dunford; Catrine Johansson; Udo Oppermann; Tom Brown; Christopher J Schofield; Richard J Hopkinson; Robert S Paton; Akane Kawamura; Jasmin Mecinović
Journal:  Chem Commun (Camb)       Date:  2017-12-12       Impact factor: 6.222

6.  Co-localisation of advanced glycation end products and D-β-aspartic acid-containing proteins in gelatinous drop-like corneal dystrophy.

Authors:  Yuichi Kaji; Tetsuro Oshika; Yutaka Takazawa; Masashi Fukayama; Noriko Fujii
Journal:  Br J Ophthalmol       Date:  2012-06-13       Impact factor: 4.638

7.  Overdose of D-serine Induces Movement Disorder and Neuromuscular Changes of Zebrafish Larvae.

Authors:  Xing-Guang Chen; Yun-Hsin Wang; Chi-Chung Wen; Yau-Hung Chen
Journal:  J Toxicol Pathol       Date:  2014-04-30       Impact factor: 1.628

8.  Acetic acid can catalyze succinimide formation from aspartic acid residues by a concerted bond reorganization mechanism: a computational study.

Authors:  Ohgi Takahashi; Ryota Kirikoshi; Noriyoshi Manabe
Journal:  Int J Mol Sci       Date:  2015-01-12       Impact factor: 5.923

9.  Identification of amino acid epimerization and isomerization in crystallin proteins by tandem LC-MS.

Authors:  Yuanqi Tao; Ryan R Julian
Journal:  Anal Chem       Date:  2014-09-16       Impact factor: 6.986

10.  Chiral amino acid metabolomics for novel biomarker screening in the prognosis of chronic kidney disease.

Authors:  Tomonori Kimura; Kenji Hamase; Yurika Miyoshi; Ryohei Yamamoto; Keiko Yasuda; Masashi Mita; Hiromi Rakugi; Terumasa Hayashi; Yoshitaka Isaka
Journal:  Sci Rep       Date:  2016-05-18       Impact factor: 4.379

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